Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: 16S ribosomal DNA identification

PROVIDER: PRJNA1210147 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31989795.fastq.gz	Fastqsanger.gz
	SRR31989796.fastq.gz	Fastqsanger.gz
	SRR31989797.fastq.gz	Fastqsanger.gz
	SRR31989798.fastq.gz	Fastqsanger.gz
	SRR31989799.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Project description:16S ribosomal DNA gene sequencing

| PRJNA667318 | ENA

Project description:sequencing of DNA from the skin microbes using 16S ribosomal DNA identification techniques

| PRJNA797483 | ENA

ena-DATASET-CBMSO-21-02-2020-14:26:33:100-537 - samples

Project description:Bacterial isolation in infected brains in patients with Huntington's disease. Here we used next generation sequencing of 16S ribosomal RNA gene PCR amplicons (NGS 16S amplicon analysis)

| EGAD00001005996 | EGA

Presence of bacterial infection in brains of patients with Huntington's disease (HD)

| EGAS00001003678 | EGA

Phosphoproteomic study of Humanin treatment on human brain tumour cells

Project description:Humanin (HN) is a 24 amino acid peptide encoded by mitochondrial DNA MT-RNR2 (16S ribosomal RNA [rRNA]). It was previously shown, that HN protects tumor cells from damage during chemotherapy. To get mechanistic insight of HN induced singaling cascades involved in brain tumor growth, we performed a global phosphoproteomic analysis total and phosphorylated proteins on human brain tumor cells after treatment with the peptide Humanin.

2024-07-15 | PXD051404 | Pride

ena-DATASET-CBMSO-08-05-2019-14:24:52:838-538 - samples

Project description:Isolation of bacteria in infected brains in patients with Parkinson's disease. Here we used next generation sequencing of 16S ribosomal RNA gene PCR amplicons (NGS 16S amplicon analysis).

| EGAD00001005003 | EGA

Presence of bacterial infection in brains of patients with Parkinson's disease (PD)

| EGAS00001003643 | EGA

Project description:16S ribosomal RNA

| PRJNA888212 | ENA

Microbiome characterization using transfer RNA sequencing

Project description:Here we report a direct tRNA sequencing protocol and software to simultaneously examine the composition and biological activity of naturally occurring microbial communities. Our analysis of mouse gut microbiome with tRNA-seq and 16S ribosomal RNA gene amplicons revealed comparable microbial community structures, and additional physiological insights into the microbiome through tRNA abundance and modifications.

2018-11-09 | GSE100263 | GEO

Effect of trans-vaccenic acid(TVA) diet on 16S ribosomal RNA (rRNA) expression of mouse gut microbiome

Project description:To investigate the TVA diet's effect on mouse gut microbiome, we fed C57/BL6 mice with TVA diet or CON diet for 18 days We then collected feces of the mice and performed 16S ribosomal RNA (rRNA) sequencing.

2023-09-21 | GSE202266 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data