Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Marmota flaviventris (yellow-bellied marmot) genome, mMarFla1, transcriptome data

PROVIDER: PRJNA1217941 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32194062_1.fastq.gz	Fastqsanger.gz
	SRR32194062_2.fastq.gz	Fastqsanger.gz
	SRR32194063_1.fastq.gz	Fastqsanger.gz
	SRR32194063_2.fastq.gz	Fastqsanger.gz
	SRR32194064_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 32

Similar Datasets

Project description:Marmota flaviventris (yellow-bellied marmot) genome, mMarFla1

| PRJNA1217010 | ENA

Project description:Marmota flaviventris (yellow-bellied marmot) genome, mMarFla1, sequence data

| PRJNA1217940 | ENA

Marmota flaviventris isolate:mMarFla1

Project description:Marmota flaviventris (yellow-bellied marmot) genome, mMarFla1, haplotype 2

| PRJNA1201325 | ENA

Marmota flaviventris isolate:mMarFla1

Project description:Marmota flaviventris (yellow-bellied marmot) genome, mMarFla1, haplotype 1

| PRJNA1201324 | ENA

Methylation studies in yellow-bellied marmots

Project description:An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from blood samples from yellow-bellied marmots (Marmota flaviventris). DNA methylation data from n=159 blood samples. All samples were collected as part of a long-term study of a free-living population of yellow-bellied marmots in the Gunnison National Forest, Colorado (USA), where marmots were captured and blood samples collected biweekly during the their active season (May to August). Genomic DNA was extracted with Qiagen DNeasy blood and tissue kit.

2022-04-13 | GSE174544 | GEO

Marmota flaviventris isolate:SJ_83

Project description:Yellow bellied marmot (Marmota flaviventris) genome sequencing and assembly

| PRJNA491472 | ENA

Gene expression shifts in yellow-bellied marmots prior to natal dispersal

Project description:We evaluated genome wide expression patterns in wild yellow-bellied marmots (Marmota flaviventris) prior to either dispersing from or remaining philopatric to their natal colony site. We identified differential expression of genes involved in lipid metabolism and muscle generation. Further, we found a network of genes involved in extra-cellular immune function and MHC class II pathways that increased in dispersers. Our results provide novel insights into the fundamental molecular changes required for natal dispersal in vertebrates.

2018-11-16 | GSE113744 | GEO

Marmota flaviventris

Project description:Marmota flaviventris overview

| PRJNA506102 | ENA

Marmota vancouverensis

Project description:Marmota vancouverensis (Vancouver Island Marmot) genomic and transcriptomic data

| PRJNA1004344 | ENA

Marmota vancouverensis

Project description:Marmota vancouverensis (Vancouver Island Marmot), mMarVan1

| PRJNA1004340 | ENA