Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cut&Tag data analysis of TgSNF2L-mAID on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

ABSTRACT: Cut&Tag data analysis of TgSNF2L-mAID on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

PROVIDER: PRJNA1244379 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR32925100_1.fastq.gz	Fastqsanger.gz
	SRR32925100_2.fastq.gz	Fastqsanger.gz
	SRR32925101_1.fastq.gz	Fastqsanger.gz
	SRR32925101_2.fastq.gz	Fastqsanger.gz
	SRR32925096_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Cut&Tag data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

Project description:Transcriptomic analyses revealed the gene expression changes after SNF2L depletion. To see which of these differentially expressed genes are directly targeted by SNF2L, we used Cut&tag to assess the binding positions of SNF2L in the parasite’s genome.

2025-05-23 | GSE293095 | GEO

Cut&Tag data analysis of TgSNF2L-mAID on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

2025-05-23 | GSE293409 | GEO

Cut&Tag data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

Project description:Cut&Tag data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L Cut&Tag]

| PRJNA1242788 | ENA

ChIP-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ChIP-seq]

Project description:ChIP-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ChIP-seq]

| PRJNA1243689 | ENA

ATAC-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ATAC-seq]

Project description:ATAC-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ATAC-seq]

| PRJNA1119404 | ENA

ChIP-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ChIP-seq]

Project description:Transcriptomic analyses revealed the gene expression changes after SNF2L depletion. To see which of these differentially expressed genes are directly targeted by SNF2L, we used chromatin immunoprecipitation, followed by deep sequencing (ChIP-Seq) to assess the binding positions of SNF2L in the parasite’s genome.

2026-03-31 | GSE293279 | GEO

ATAC-seq data analysis of TgSNF2L on the whole genome of Toxoplasma gondii tachyzoites [SNF2L ATAC-seq]

Project description:To understand the changes in chromatin structure following SNF2L deletion, we used the Assay for Transporse-Accessible Chromatin with High-throughput Sequencing (ATAC-seq) to assess changes in chromatin accessibility following SNF2L deletion.

2025-05-23 | GSE268890 | GEO

RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

Project description:To investigate transcriptional role of TgSNF2L on type II Toxoplasma gondii (ME49 Tir1), an auxin inducible degron system was introduced to control the protein expression of TgSNF2L after adding IAA.

2025-05-23 | GSE268892 | GEO

RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

Project description:RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

| PRJNA1119402 | ENA

CUT&TAG of OE19 cell line

Project description:To map the chromatin binding sites for SMC1 in OE19 cells, we performed CUT&TAG.

2024-09-25 | E-MTAB-14090 | biostudies-arrayexpress