Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

ABSTRACT: RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

PROVIDER: PRJNA1119402 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29263003_1.fastq.gz	Fastqsanger.gz
	SRR29263003_2.fastq.gz	Fastqsanger.gz
	SRR29263004_1.fastq.gz	Fastqsanger.gz
	SRR29263004_2.fastq.gz	Fastqsanger.gz
	SRR29263005_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

RNA-seq data analysis of TgSNF2L on Toxoplasma gondii development [ME49 SNF2L RNAseq]

Project description:To investigate transcriptional role of TgSNF2L on type II Toxoplasma gondii (ME49 Tir1), an auxin inducible degron system was introduced to control the protein expression of TgSNF2L after adding IAA.

2025-05-23 | GSE268892 | GEO

Toxoplasma gondii ME49

Project description:Toxoplasma gondii ME49

| PRJNA28893 | ENA

Toxoplasma gondii ME49

Project description:Toxoplasma gondii ME49 Raw sequence reads

| PRJNA436351 | ENA

RNA-seq data analysis of TgAP2XII-1 on Toxoplasma gondii merozoites development [ME49 XII-1 RNAseq]

Project description:To investigate transcriptional role of TgAP2XII-1 on type II Toxoplasma gondii (ME49 Tir1), an auxin inducible degron system was introduced to control the protein expression of TgAP2XII-1 and the target protein could be totally degradated in 3h after adding IAA.

2023-05-01 | GSE228580 | GEO

Toxoplasma gondii RNASeq

Project description:Toxoplasma gondii RNASeq

| PRJEB2434 | ENA

Strain-dependent host responses in chicken embryonic fibroblasts infected with Toxoplasma gondii [ME49, CEP, and Mock]

Project description:Toxoplasma gondii is a ubiquitous protozoan pathogen able to infect both mammalian and avian hosts. Surprisingly, just three strains appear to account for the majority of isolates from Europe and N. America. To test the hypothesis that strain divergence might be driven by differences between mammalian and avian response to infection, we examine in vitro strain-dependent host responses in a representative avian host, the chicken. Chicken embryonic fibroblasts were cultivated in vitro and infected with different strains of Toxoplasma gondii (Type II = ME49, Type III = CEP); host transcriptional responses were then analyzed at 24 hours post-infection.

2011-05-27 | E-GEOD-29562 | biostudies-arrayexpress

RNA-seq data analysis of TGME49_217480 on Toxoplasma gondii development [TGME49_217480 RNAseq]

Project description:To investigate transcriptional role of TGME49_217480 on type II Toxoplasma gondii (ME49 Tir1), an auxin inducible degron system was introduced to control the protein expression of TGME49_217480 after adding IAA.

2025-05-23 | GSE268750 | GEO

RNA-seq data analysis of TGME49_203980 on Toxoplasma gondii development [TGME49_203980 RNAseq]

Project description:To investigate transcriptional role of TGME49_203980 on type II Toxoplasma gondii (ME49 Tir1), an auxin inducible degron system was introduced to control the protein expression of TGME49_203980 after adding IAA.

2025-05-23 | GSE268652 | GEO

HFF Cells: Control vs. Toxoplasma gondii infected

Project description:Expression profile microarray of human foreskin fibroblast cell comparing control untreated HFF cell with HFF cell infected with ME49 strain.Study on Toxoplasma gondii infection of HFF cell LncRNAs expression, for further studies on the differential exprssion of LncRNAs in HFF cell against the infection of Toxoplasma gondii research provide the basic function.

2017-01-01 | GSE92603 | GEO

Toxoplasma gondii RNASeq

Project description:Recent advances in high throughput sequencing methodologies allow the opportunity to probe in depth the transcriptomes of organisms including N. caninum and Toxoplasma gondii. In this project, we are using Illumina sequencing technology to analyze the transcriptome (RNA-Seq) of experimentally accessible stages (e.g. tachyzoites at different times points) of T. gondii VEG strain. The aim is to make comparative transcriptional landscape maps of Neospora and Toxoplasma at different time points at different life cycle stages and compare levels of expression of orthologous genes in these two organisms.

2011-02-08 | E-MTAB-550 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data