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ABSTRACT: Calf manure bacteria transplantation metagenome

PROVIDER: PRJNA1253317 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR33249054_1.fastq.gz	Fastqsanger.gz
	SRR33249054_2.fastq.gz	Fastqsanger.gz
	SRR33249058_1.fastq.gz	Fastqsanger.gz
	SRR33249058_2.fastq.gz	Fastqsanger.gz

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Project description:The objective of this study was to compare liver gene expressions in bovine fetuses derived from somatic cell nuclear transplantion (NT) with those in the liver of bovine fetuses derived from artificial insemination (AI) and in vitro fertilized (IVF) eggs. Gene expression profiles in the liver of an NT-calf was also compared with those in the liver of AI-calf. Keywords = nuclear transplantation Keywords = bovine Keywords = liver gene expression Keywords = fetus Keywords: parallel sample

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Project description:Bile acids are steroid compounds from the digestive tracts of vertebrates that enter agricultural environments in unusual high amounts with manure. Bacteria degrading bile acids can readily be isolated from soils and waters including agricultural areas. Under laboratory conditions, these bacteria transiently release steroid compounds as degradation intermediates into the environment. These compounds include androstadienediones (ADDs), which are C19-steroids with potential hormonal effects. Experiments with Caenorhabditis elegans showed that ADDs derived from bacterial bile acid degradation had effects on its tactile response, reproduction rate, and developmental speed. Additional experiments with a deletion mutant as well as transcriptomic analyses revealed that these effects might be conveyed by the putative testosterone receptor NHR-69. Soil microcosms showed that the natural microflora of agricultural soil is readily induced for bile acid degradation accompanied by the transient release of steroid intermediates. Establishment of a model system with a Pseudomonas strain and C. elegans in sand microcosms indicated transient release of ADDs during the course of bile acid degradation and negative effects on the reproduction rate of the nematode. This proof-of-principle study points at bacterial degradation of manure-derived bile acids as a potential and so-far overlooked risk for invertebrates in agricultural soils.

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