Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Sequencing of Tianchang Sanhuang Chickens with Different Residual Feed Intake.

PROVIDER: PRJNA1266125 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR33659432_1.fastq.gz	Fastqsanger.gz
	SRR33659432_2.fastq.gz	Fastqsanger.gz
	SRR33659433_1.fastq.gz	Fastqsanger.gz
	SRR33659433_2.fastq.gz	Fastqsanger.gz
	SRR33659434_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Expression data from Chicken duodenum

Project description:The objective of this study was to decipher the molecular basis of feed efficiency in meat-type chicken using duodenum tissues from a chicken population divergently selected for residual feed intake (RFI). Residual feed intake is the deviation of expected feed intake from actual feed intake. Chickens that consume less feed than expected are efficient (LRFI) and chickens that consume more feed than expected are inefficient (HRFI). A divergent selection for RFI was undertaken using an unselected random bred chicken population. RFI at day 35-42 was used as a criterion for selecting low (LRFI) and high (HRFI) RFI. Duodenum tissues were collected from 16 male chickens under sterile conditions experimentation. Tissues were collected from 4 males at days 35 and 42 in each line. Duodenum at 35 and 42 days from a chicken population divergently selected for residual feed intake were utilized for RNA extraction and hybridization on Affymetrix microarrays.

2012-08-01 | E-GEOD-39824 | biostudies-arrayexpress

Expression data from Chicken duodenum

2012-08-02 | GSE39824 | GEO

RNA-Seq of the liver and muscle of chickens differing in feed conversion efficiency (FCE)

Project description:Chickens (Cobb500FF) divergent in residual feed intake were analyzed for the muscle and liver transcriptomic profiles.

2024-12-29 | E-MTAB-12147 | biostudies-arrayexpress

Transcriptional shifts account for divergent resource allocation in feed efficient broiler chickens

Project description:Chickens (Cobb500FF) divergent in residual feed intake were analyzed for muscular (M. pectoralis), duodenal, jejunal and ileal transcriptomic profiles.

2020-03-04 | E-MTAB-6169 | biostudies-arrayexpress

Project description:Pig with High residual feed intake or low residual feed intake

| PRJNA701065 | ENA

Project description:residual feed intake (RFI)

| PRJNA438831 | ENA

Project description:Residual feed intake (RFI)

| PRJNA796465 | ENA

An examination of the transcriptional control of energetic efficiency in cattle divergent for RFI

Project description:The selection of cattle with high feed efficiency is of paramount importance with regard to reducing feed costs in the beef industry. Global gene expression patterns in metabolically important tissues can be used to identify genes that are potentially involved in regulating feed efficiency. We identified 5 genes (p<0.001;FDR <0.1) to be differentially expressed in skeletal skeletal muscle between high and low residual feed intake heifers with all 5 transcripts being upregulated in the low residual feed intake phenotype. Among these differentially expressed genes, all transcripts were related to oxidative phosphorylation and mitochondrial homeostasis. A total of 11 genes (p<0.001;FDR <0.1) were differentially expressed in hepatic tissue tissue between high and low residual feed intake bulls with 8 transcripts being upregulated and 3 being downregulated in the low residual feed intake phenotype. These differentially expressed genes were related to oxidative response, protein mediation and cell signalling. Pathway analysis on the RNAseq data indicates a relationship between oxidative phosphorylation and residual feed intake in skeletal muscle and aldosterone signalling and NRF2 mediated oxidative stress in hepatic tissue.

2021-05-05 | GSE112793 | GEO

Transcriptome analysis of mRNA expression in skeletal muscle of Yorkshire pigs with differential residual feed intake

Project description:Feed accounts for more than 60% of the costs for pig production, and FE can be measured as residual feed intake (RFI). In this study, we compared the transcriptome difference of longissimus dorsi muscles of Yorkshire pigs with high RFI (RFI_H) and low RFI (RFI_L) using Solexa mRNA sequencing.

2015-05-31 | E-MTAB-2946 | biostudies-arrayexpress

Transcriptome analysis of miRNA expression in skeletal muscle of Yorkshire pigs with differential residual feed intake

2015-05-31 | E-MTAB-2949 | biostudies-arrayexpress