Project description:We present a comprehensive transcriptome of ciliate T. thermophila using the Illumina RNA-seq platform. The data was generated from the six mRNA samples of growth, starvation and conjugation of Tetrahymena. Despite an AT rich genome, there are about 124.6 million reads mapped to T. thermophila genome. Using these mapped reads, we have significantly improved the previous genome annotation and investigated the gene expression. Besides, our result also provided a comprehensive understanding of the alternative splicing in T. thermophila, and suggested the existence of the regulated unproductive splicing and translation (RUST) in the single-celled eukaryote. RNA-seq for six samples of Tetrahymena growth, starvation and conjugation.

2012-03-15 | E-GEOD-27971 | biostudies-arrayexpress

RNA-seq analysis of Tetrahymena thermophila

2012-03-15 | GSE27971 | GEO

Tepidiforma thermophila strain:G233

Project description:Tepidiforma thermophila strain:G233 Genome sequencing and assembly

| PRJNA323209 | ENA

Lutispora thermophila strain:m25

Project description:Lutispora thermophila strain:m25 Genome sequencing and assembly

| PRJNA772957 | ENA

Calcarisporiella thermophila strain:CBS 279.70

Project description:Calcarisporiella thermophila strain:CBS 279.70 Genome sequencing

| PRJNA1064976 | ENA