Arabidopsis thaliana strain:Columbia-0
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA194429 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR847501.fastq.gz | Fastqsanger.gz | |||
| SRR847502.fastq.gz | Fastqsanger.gz | |||
| SRR847503.fastq.gz | Fastqsanger.gz | |||
| SRR847504.fastq.gz | Fastqsanger.gz | |||
| SRR847505.fastq.gz | Fastqsanger.gz |
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Project description:This study investigates extent and functional significance of alternative splicing in Arabidopsis thaliana defense against the bacterial pathogen Pseudomonas syringae pv tomato (Pst). We have provided a detailed characterization of the Arabidopsis thaliana transcriptional response to Pseudomonas syringae infection in both susceptible and resistant hosts. We carried out two independent inoculation experiments (biological replicates) for each treatment. Col-0 is susceptible to virulent Pst DC3000 but has a functional RPS4 resistance gene effective against DC3000 expressing AvrRps4
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Project description:This experiment has been annotated by TAIR (http://arabidopsis.org). In this experiment, different tissue preparations of wild type Columbia-0 Arabidopsis thaliana plants were hybridized and run on the ATH1 Affymetrix platform. Experimenter name = Chris Somerville Experimenter phone = 650-325-1521 ext203 Experimenter fax = 650-325-6857 Experimenter address = Plant Biology Experimenter address = Carnegie Institution Experimenter address = 260 Panama Street Experimenter address = Stanford Experimenter zip/postal_code = CA 94305-1297 Experimenter country = USA Keywords: organism_part_comparison_design;
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