Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil metagenome

ABSTRACT: Arable soils under rice-wheat cropping system

PROVIDER: PRJNA198445 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR835387.fastq.gz	Fastqsanger.gz
	SRR835388.fastq.gz	Fastqsanger.gz
	SRR835389.fastq.gz	Fastqsanger.gz
	SRR835390.fastq.gz	Fastqsanger.gz
	SRR835391.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

soil metagenome

Project description:Arable soils under rice-wheat cropping system Metagenome

| PRJNA197430 | ENA

soil metagenome

Project description:Paddy soils under different fertilizer regimes in a rice-wheat cropping system Metagenome

| PRJNA233972 | ENA

soil metagenome

Project description:arable soils Grossbeeren/Kleinwanzleben Targeted loci

| PRJNA319487 | ENA

soil metagenome

Project description:The grassland and arable soils Metagenome

| PRJNA285405 | ENA

Effect of land use and soil organic matter quality on the structure and function of microbial communities in pastoral soils: implications for disease suppression

Project description:Cropping soils vary in extent of natural suppression of soil-borne plant diseases. However, it is unknown whether similar variation occurs across pastoral agricultural systems. We examined soil microbial community properties known to be associated with disease suppression across 50 pastoral fields varying in management intensity. The composition and abundance of the disease-suppressive community were assessed from both taxonomic and functional perspectives.

2018-03-30 | GSE112489 | GEO

soil metagenome

Project description:Diversity of nosZ amplicons across arable soils

| PRJNA382776 | ENA

soil metagenome

Project description:Arable and pasture soils spiked with anthracene Metagenome

| PRJNA284286 | ENA

Structure and variation in microbiome from continuous and rotational Pinellia ternata cropping soils

Project description:We used wheat as rotational crop to assess the influence of continuous cropping on microbiome in Pinellia ternata rhizosphere and the remediation of rotational cropping to the impacted microbiota. Illumina high-throughput sequencing technology was utilized for this method to explore the rhizosphere microbial structure and diversity based on continuous and rotational cropping.

2016-12-10 | GSE91083 | GEO

soil metagenome

Project description:Methane/ammonia-oxidizing bacteria from an extreme and arable soils

| PRJNA545534 | ENA

Dissecting the Variations of Ripening Progression and Flavonoid Metabolism in Grape Berries Grown under Double Cropping System

Project description:A double cropping system has been commercially adopted in subtropical regions in southern China, where there is abundant sunshine and heat resources. In this viticulture system, the first growing season normally starts as a summer cropping cycle; then, the vine is pruned and forced by hydrogen cyanamide, resulting in a second crop in January of the next year. Due to climate differences between the two growing seasons, flavonoid content and composition varies greatly. In this study, changes in the transcriptome of flavonoid-associated pathways were compared in berries grown under the double cropping system; in addition, the accumulation of flavonoid compounds was compared. Specific alterations in MYB transcription factors occurred in winter cropping berries around veraison. Then, the winter cropping cycle distinctly induced the flavonoid metabolic pathways while triggering the ripening-associated pathways. Notably, the climate conditions in winter cropping positively affected flavonoid biosynthesis, while the summer season took a major toll on anthocyanin accumulation. In addition, the three classes of flavonoid compounds responded differently to the changing climate; the anthocyanins and flavonols were promoted several fold, whereas no consistent increase was found for flavan-3-ols. Conclusively, flavonoid biosynthesis in grapes grown under a double cropping system showed seasonal or climatic-specific accumulation patterns.

2017-10-01 | GSE103226 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data