Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Actinopolyspora erythraea strain:YIM90600

ABSTRACT: Actinopolyspora erythraea strain:YIM90600 Genome sequencing and assembly

PROVIDER: PRJNA255193 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Actinopolyspora erythraea

Project description:Actinopolyspora erythraea overview

| PRJNA389620 | ENA

Actinopolyspora erythraea strain:YIM 90600

Project description:Actinopolyspora erythraea strain:YIM 90600 Genome sequencing and assembly

| PRJNA389211 | ENA

Transcriptome analysis of wild type and erythromycin-producing strain of S. erythraea

Project description:Erythromycin is a medically important antibiotic, biosynthesized by the actinomycete Saccharopolyspora erythraea. We used transcriptomic approach to compare whole genome expression in erythromycin high-producing strain, compared to the wild type S. erythraea strain in four stages of fermentation.

2016-06-22 | GSE65007 | GEO

Saccharopolyspora erythraea RNA-seq

Project description:We report the high-throughput profiling of saccharopolyspora erythraea including a industrial strain HL3168 E3 and a wild-type strain NRRL23338. The aim was to evaluate the difference in expression of sRNA predicted in silico related to secondary metabolites in Saccharopolyspora erythraea.

2013-07-16 | GSE48887 | GEO

Transcriptome analysis of wild type and erythromycin-producing strain of S. erythraea

2016-06-22 | E-GEOD-65007 | biostudies-arrayexpress

Saccharopolyspora erythraea strain:E3

Project description:Saccharopolyspora erythraea strain:E3 Genome sequencing and assembly

| PRJNA634475 | ENA

Saccharopolyspora erythraea RNA-seq

2013-07-16 | E-GEOD-48887 | biostudies-arrayexpress

Effect of artificial control system (hQSCS) on native transcriptome of S. erythraea during erythromycin fermentation

Project description:Reconstructing an artificial control system orthogonal to the native regulatory network of Saccharopolyspora erythraea is critical for circumventing the constraints imposed by its complex endogenous regulation. Here, we present a transcriptional profiling dataset of S. erythraea strain harboring the heterologous QS control system (hQSCS) during erythromycin fermentation. This dataset was generated to characterize the transcriptional response of host cells upon activation of the heterologous hQSCS. Specifically, RNA sequencing was performed on strain without hQSCS (control) and hQSCS engineered strain (treatment), both cultured in TSB medium for 72 h. Differential expression analysis of this dataset will help determine whether hQSCS exerts regulatory crosstalk with the native transcriptome of S. erythraea, which is essential for verifying the orthogonality of hQSCS. Collectively, this transcriptional dataset provides a valuable resource for investigating the orthogonality of hQSCS in S. erythraea and offers insights into the development of orthogonal control systems for other rare actinomycetes.

2026-06-01 | GSE316160 | GEO

Triplophysa erythraea

Project description:Triplophysa erythraea Genome sequencing and assembly

| PRJNA1099222 | ENA

Saccharopolyspora erythraea D strain:D

Project description:Saccharopolyspora erythraea D strain:D Genome sequencing and assembly

| PRJNA214030 | ENA