Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mus musculus

ABSTRACT: Drop-Seq analysis of P14 mouse retina single-cell suspension

OTHER RELATED OMICS DATASETS IN: EGAD00001006080EGAS00001004381GSE63269GSE70151

PROVIDER: PRJNA267857 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1853180_1.fastq.gz	Fastqsanger.gz
	SRR1853180_2.fastq.gz	Fastqsanger.gz
	SRR1853181_1.fastq.gz	Fastqsanger.gz
	SRR1853181_2.fastq.gz	Fastqsanger.gz
	SRR1853182_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 14

Similar Datasets

Drop-Seq analysis of P14 mouse retina single-cell suspension

Project description:A cell suspension was prepared from wild-type P14 mouse retinas, and single-cell mRNAseq libraries were generated with Drop-Seq.

2015-05-20 | GSE63472 | GEO

Drop-Seq analysis of P14 mouse retina single-cell suspension

Project description:A cell suspension was prepared from wild-type P14 mouse retinas, and single-cell mRNAseq libraries were generated with Drop-Seq. Drop-Seq was performed on four separate days using the same age (P14) and strain (C57BL/6). On day 1, replicate 1 was obtained. On day 2, replicates 2 and 3 were obtained. On day 3, replicates 4-6 were obtained. On day 4, replicate 7 was obtained.

2015-05-20 | E-GEOD-63472 | biostudies-arrayexpress

Single cell sequencing of hypothalamus tissues in IDOL KO

Project description:A single cell suspension was generated from IDOL KO and Control mouse hypothalami, and single-cell mRNAseq libraries were generated with Drop-Seq.

2019-10-01 | GSE119960 | GEO

Single cell sequencing of hippocampus tissues in traumatic brain injury

Project description:A single cell suspension was generated from 24hr TBI and Sham mouse hippocampi, and single-cell mRNAseq libraries were generated with Drop-Seq.

2018-09-26 | GSE101901 | GEO

Single-cell RNAseq by Dropseq of retinal endothelial cells from WT and ENOS KO mouse

Project description:We report the generation of single-cell RNAseq data obtained using Drop-seq from endothelial-enriched retinal cell suspension. Single-cell suspension were enriched using CD-31 antibody coated magnetic beads, and processed for encapsulation and library preparation as in Macosko et al (Cell 2015) based on the Drop-seq procedure.

2022-01-02 | GSE174400 | GEO

Drop-Seq analysis of rTg4510 mouse hippocampus and control at young and old age

Project description:Single cell suspension of hippocampus was generated and single cell mRNAseq libraries were prepared using Drop-seq.

2020-05-01 | GSE115243 | GEO

Single cell sequencing of stromal vascular fraction (SVF) under B3-adrenergic agonist stimulation and mature adipocytes under cold exposure and B3-adrenergic agonist stimulation

Project description:A single cell suspension was generated from B3-adrenergic agonist (CL; 1 mg/kg/day) for 4 days and saline mouse SVF, and single-cell mRNAseq libraries were generated with Drop-Seq. A single cell suspension was generated from mouse mature adipocyte nuclei under the following conditions: RT, 24hrs @ 4 °C , 48hrs @ 4 °C, 4days @ 4 °C and B3-adrenergic agonist (CL; 1 mg/kg/day) and single-cell mRNAseq libraries were generated with 10X genomics.

2019-10-17 | GSE133486 | GEO

Bidirectional Introgression between Mus musculus domesticus and Mus spretus.

Project description: Not available

| S-EPMC8784167 | biostudies-literature

snRNA-seq of mouse (Mus musculus) adult testis

Project description:Single-nucleus RNA sequencing (snRNA-seq) was used to profile the transcriptome of 5,264 nuclei in mouse adult testis. This dataset includes two samples from two different individuals. This dataset is part of a larger evolutionary study of adult testis at the single-nucleus level (97,521 single-nuclei in total) across mammals including 10 representatives of the three main mammalian lineages: human, chimpanzee, bonobo, gorilla, gibbon, rhesus macaque, marmoset, mouse (placental mammals); grey short-tailed opossum (marsupials); and platypus (egg-laying monotremes). Corresponding data were generated for a bird (red junglefowl, the progenitor of domestic chicken), to be used as an evolutionary outgroup.

2021-11-08 | E-MTAB-11071 | biostudies-arrayexpress