Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mus musculus

ABSTRACT: Investigating GPR34 expression regulation using whole transcriptome sequencing of spleens and dendritic cells from wildtype and GPR34 knockout mice

PROVIDER: PRJNA281932 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1986140_1.fastq.gz	Fastqsanger.gz
	SRR1986140_2.fastq.gz	Fastqsanger.gz
	SRR1986150_1.fastq.gz	Fastqsanger.gz
	SRR1986150_2.fastq.gz	Fastqsanger.gz
	SRR1986160_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 62

Similar Datasets

Investigating GPR34 expression regulation using whole transcriptome sequencing of spleens and dendritic cells from wildtype and GPR34 knockout mice

Project description:Naive spleens as well as naive and LPS-treated dendritic cells from wildtype and GPR34-/- mice were sequenced to integrate expression profiles with protein interaction networks and find functional modules that are affected by GPR34 Expression profiles of dendritic cells and whole spleens were generated using Illumina HiSeq 2500/ Illumina HiScan

2016-03-02 | E-GEOD-68155 | biostudies-arrayexpress

Investigating GPR34 expression regulation using whole transcriptome sequencing of spleens and dendritic cells from wildtype and GPR34 knockout mice

2016-03-02 | GSE68155 | GEO

Lipopolysaccharide (LPS) effect on ficolin deficient spleen

Project description:Analysis of spleens from ficolin knockout and wildtype mice treated without and with LPS to induce inflammation. Ficolins are pattern recognition molecules that initiate the lectin pathway of complement. Results provide insigt into the molecular basis of the inflammatory response of ficolin knockout mice.

2017-02-22 | GSE95125 | GEO

microbiota regualtion of miRNA

Project description:This experiment was investigating how gut commensal bacteria and intestinal inflammation affect miRNA expression. We analyzed miRNA expression of spleen and intestine from specific pathogen free (SPF) B6 mice, germ-free (GF) B6 mice, and IL-10 knockout mice which have severe colitis by microarray. Thus we have total 6 samples: GF spleen; GF intestines; SPF spleen; SPF intestine; IL-10 KO spleen and IL-10 KO intestine. We directly isolated RNA from whole spleens or intestines without any treatments, and then did microarray analysis.

2011-11-23 | E-MEXP-3406 | biostudies-arrayexpress

Mus musculus

Project description:Nrf2 Knockout vs. Wildtype mice, liver sample

| PRJNA89829 | ENA

Mus musculus

Project description:Nrf2 Knockout vs. Wildtype mice, spleen sample

| PRJNA89831 | ENA

Gene expression profile comparison of DC subsets

Project description:To evaluate gene expression profiles on different dendritic cell subsets isolated from spleens of mice We used whole genome microarrays to identify genes specific to pDCs and not other DC subsets in the absence of disease

2015-12-10 | GSE75834 | GEO

Gene expression profile comparison of DC subsets

2015-12-10 | E-GEOD-75834 | biostudies-arrayexpress

Effects of VLK knockout on the proteome of primary mouse hepatocytes

Project description:In the project « VLK in liver protection », we analyzed conditioned medium and whole cell lysate of Y/A/C-treated hepatocytes isolated from wildtype (WT) and VLK knockout (KO) mice, three biological replicates each.

2022-03-24 | PXD031378 | Pride

Arc/Arg3.1 functionally defines migrating 1 dendritic cells and regulates actin dynamics

Project description:We compared the expression profiles of bone marrow-derived dendritic cells (BMDC) derived from Arc/Arg3.1 knockout and wildtype animals. We generated bone marrow-derived dendritic cells (BMDC) from Arc/Arg3.1 knockout and wildtype animals. BMDC were either stimulated with LPS or left untreated and analysed by microarray.

2015-08-12 | E-GEOD-71937 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data