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Mus musculus

ABSTRACT: Regulated Capture of Vk Gene Topologically Associating Domains by Transcription Factories

PROVIDER: PRJNA330864 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR3943520.fastq.gz	Fastqsanger.gz
	SRR3943550_1.fastq.gz	Fastqsanger.gz
	SRR3943550_2.fastq.gz	Fastqsanger.gz
	SRR3943560_1.fastq.gz	Fastqsanger.gz
	SRR3943560_2.fastq.gz	Fastqsanger.gz

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Project description:We explored the relationship between the evolutionary dynamics of CTCF binding and the functional stability of higher order genome structures, by performing ChIP-seq experiments in closely related Mus species or strains and intersecting with Hi-C-derived topologically associating domains (TADs) and expression data. All experiments were performed in adult male liver samples in 3 biological replicates and with an input control set. We also generated RAD21 (cohesin subunit) ChIP-seq from a replicate of adult male mouse (C57BL/6J) liver to determine localization of cohesin with respect to CTCF.

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KSHV Topologically Associating Domains in Latent Chromatin and Regulation of Reactivation

Project description:KSHV Topologically Associating Domains in Latent Chromatin and Regulation of Reactivation

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Bidirectional Introgression between Mus musculus domesticus and Mus spretus.

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