Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Schmidtea mediterranea breed:Sexual

ABSTRACT: NPY-8-internalizing cells transcriptome in Schmidtea mediterranea

PROVIDER: PRJNA348639 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4427740.fastq.gz	Fastqsanger.gz
	SRR4427741.fastq.gz	Fastqsanger.gz
	SRR4427734.fastq.gz	Fastqsanger.gz
	SRR4427735.fastq.gz	Fastqsanger.gz
	SRR4427736.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

The head-regeneration transcriptome of the planarian Schmidtea mediterranea

Project description:The head-regeneration transcriptome of the planarian Schmidtea mediterranea

2011-07-15 | E-MTAB-607 | biostudies-arrayexpress

Expression analysis of purified intestinal phagocytes in Schmidtea mediterranea

Project description:Identification of differentially expressed genes in intestinal phagocytes, compared to non-intestinal cells in Schmidtea mediterranea.

2012-10-01 | GSE35565 | GEO

Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea

2012-04-25 | GSE34326 | GEO

Schmidtea mediterranea

Project description:Schmidtea mediterranea Transcriptome or Gene expression

| PRJNA241456 | ENA

Schmidtea mediterranea

Project description:Schmidtea mediterranea Transcriptome or Gene expression

| PRJNA208294 | ENA

Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea

Project description:The transcriptome of the planarian Schmidtea mediterranea is not well characterized. We have used RNA-Seq to characterize the transcriptome in both sexual and asexual strains of S. mediterranea from both untreated and irradiated animals. Moreover, we have performed RNA-Seq on RNA purified from FACS sorted neoblasts and differentiated cells. Together these studies expand our understanding of the planarian transcriptome and have identified strain-specific, neoblast-specific, and conserved transcripts. RNA-Seq was performed on RNA isolated from untreated and irradiated S. mediterranea animals from both the sexual and asexual strains, on FACS purified X1 neoblasts, X2 neoblasts, and Xins differentiated cells. One of the raw data files for GSM847465 is missing. The fasta file is provided at http://genome.vcell.uchc.edu/GenomeData02/Graveley_Lab_Public_Data/Planarian/S.mediterranea_SexNIRmRNA3.fa.gz

2012-04-24 | E-GEOD-34326 | biostudies-arrayexpress

Schmidtea mediterranea strain:asexual

Project description:Schmidtea mediterranea Transcriptome Assembly

| PRJNA252663 | ENA

Schmidtea mediterranea strain:CIW4

Project description:Schmidtea mediterranea CIW4 Transcriptome

| PRJNA215411 | ENA

[E-MTAB-607] Transcription profiling by high throughput sequencing of the planarian Schmidtea mediterranea during head regeneration

Project description:The head-regeneration transcriptome of the planarian Schmidtea mediterranea ArrayExpress Release Date: 2011-07-15 Publication Title: The head-regeneration transcriptome of the planarian Schmidtea mediterranea Publication Author List: Thomas Sandmann, Matthias C. Vogg, Suthira Owlarn, Michael Boutros, and Kerstin Bartscherer Person Roles: submitter Person Last Name: Sandmann Person First Name: Thomas Person Mid Initials: Person Email: t.sandmann@dkfz.de Person Phone: +49 6221 42 1954 Person Address: Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 580, D-69120 Heidelberg, Germany Person Affiliation: German Cancer Research Center

2012-01-20 | GSE30996 | GEO

Schmidtea mediterranea

Project description:Schmidtea mediterranea Raw sequence reads

| PRJNA318690 | ENA