Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Populus trichocarpa cultivar:Nisqually-1

ABSTRACT: Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-I09 transcriptome

PROVIDER: PRJNA402529 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7495382_1.fastq.gz	Fastqsanger.gz
	SRR7495382_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-I07 transcriptome

| PRJNA402524 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-G07 transcriptome

| PRJNA402523 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-I01 transcriptome

| PRJNA402526 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-I02 transcriptome

| PRJNA402527 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-G04 transcriptome

| PRJNA402528 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Gene expression analysis of Populus trichocarpa Nisqually-1 - mature leaf - 076-G05 transcriptome

| PRJNA402530 | ENA

High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1

Project description:Abiotic stress is a major factor affecting the growth, development, yield and quality in plants including the important biomass yield such as in a bioenergy feedstock crops. In a first of its kind, RNA-seq based high resolution survey of abiotic stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa accesion Nisqually-1) was carried out by way of 81 libraries made from total RNA isolated from three tissues, mature vascular leaf, stem xylem and root sampled from plants subjected to untreated control and treated with four individual stress treatments cold, heat, drought and high salinity. For every tissue and treatment type including controls, three individual plants were used per treatment as biological replicates. This research project is supported by the DOE Office of Science, Office of Biological and Environmental Research (BER), USA, grant no. DE-SC0008570

2018-02-23 | E-MTAB-5540 | biostudies-arrayexpress

Populus trichocarpa cultivar:Nisqually-1

Project description:Populus trichocarpa Nisqually-1 Transcriptome - 076-I08

| PRJNA478981 | ENA

Populus trichocarpa cultivar:Nisqually-1

Project description:Populus trichocarpa Nisqually-1 transcriptome - 102-I09 - 29_NAA_5uM_3hr

| PRJNA442285 | ENA

Ozone exposure of Populus deltoides and Populus trichocarpa

Project description:Populus deltoides and Populus trichocarpa were exposed to either ambient air or an acute ozone exposure of 200 ppb for 9 hrs and ozone response was profiled for each genotype by hybridising control against ozone-exposed samples per genotype. Keywords: stress response, genotype comparrison, ozone exposure RNA was extracted from the fifth leaf below the first fully unfurled leaf for each plant. Control and ozone-exposed plants were then randomly paired for hybridisation.

2009-04-01 | E-GEOD-10874 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data