Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

ABSTRACT: Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

PROVIDER: PRJNA421557 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6359830.fastq.gz	Fastqsanger.gz
	SRR6359840.fastq.gz	Fastqsanger.gz
	SRR6359850.fastq.gz	Fastqsanger.gz
	SRR6359860.fastq.gz	Fastqsanger.gz
	SRR6359870.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

Project description:Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

2020-12-06 | GSE107833 | GEO

Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2019-02-05 | GSE107834 | GEO

The contribution of the post-transcriptional regulator CsrA to translation

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2017-12-06 | GSE102385 | GEO

The contribution of the post-transcriptional regulator CsrA to RNA stability

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability during exponential growth in Escherichia coli

2017-12-06 | GSE102381 | GEO

Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability in Salmonella during growth in LB and mLPM media

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability in Salmonella during growth in LB and mLPM media

2019-02-05 | GSE107835 | GEO

RNA binding partners of the post-transcriptional regulator CsrA

Project description:Analysis of RNA binding partners of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2017-12-06 | GSE102380 | GEO

Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

| PRJNA421559 | ENA

CLIP-seq of CsrA foci in Enteropathogenic E. coli

Project description:The RNA content of the CsrA foci. EPEC (E2348/69 (strain O127:H6)) expressing CsrA-FLAGx3-GFP or wild-type EPEC expressing untagged CsrA (negative control) were grown to OD 0.6 in DMEM and subjected to the foci-enrichment protocol, followed by RNA extraction and library preparation. Six libraries were prepared, containing three biological repeats of csrA-3 x flag-gfp and three repeats of wt.

2025-04-14 | E-MTAB-14951 | biostudies-arrayexpress

Next-Generation Sequencing Facilitates Quantitative Analysis of Wild Type and csrA Mutant Helicobacter pylori J99 Transcriptomes

Project description:Purpose: The goals of this study are to clarify the CsrA-regulatory system in H. pylori by NGS-derived transcriptome profiling (RNA-seq). Method: CsrA regulatory system was determined by comparative transcriptomic analysis carried out with RNA-seq on strain J99 and csrA mutant. Results: Using an optimized data analysis workflow, fifty-three genes in the csrA mutant were found to be differentially expressed compared with the wild-type. Conclusions: Our study represents the first detailed analysis of CsrA-regulatory system in H. pylori J99.

2017-02-17 | GSE95006 | GEO

CLIP-seq of CsrA foci in Enteropathogenic E. coli

Project description:CLIP-seq of CsrA foci in Enteropathogenic E. coli

| PRJEB87337 | ENA