Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Dolichoderus spp. and their bacterial symbionts

ABSTRACT: The characterization of Bartonellaceae symbionts of Dolichoderus spp. ants

PROVIDER: PRJNA430989 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR6512810_1.fastq.gz	Fastqsanger.gz
	SRR6512810_2.fastq.gz	Fastqsanger.gz
	SRR6512801_1.fastq.gz	Fastqsanger.gz
	SRR6512801_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 31

Similar Datasets

Heterologous Microarray Hybridization Between Vesicomyid Symbionts

2008-11-28 | GSE13447 | GEO

Heterologous Microarray Hybridization Between Vesicomyid Symbionts

Project description:The goal of this study was to use heterologous microarray hybridization to determine genomic content shared among different vesicomyid symbionts. These symbionts are closely related and can be thought of as different strains of bacteria, facilitating the use of heterologous microarray hybridization to determine genomic content. Keywords: comparative genomic hybridization Microarrays were built off the Ruthia magnifica genome and two replicate hybridizations to this organism were used as a baseline for comparisons. Genomic DNA from two other vesicomyid symbionts (Calyptogena kilmeri and C. pacifica symbionts) was also hybridized to the array with three biological replicates for each sample.

2010-05-15 | E-GEOD-13447 | biostudies-arrayexpress

The Host Modulates Transcriptional Profile and Phenotypic Heterogeneity in Symbionts

Project description:Host-microbe interactions are virtually bidirectional, benefiting both the host and microbial sides. It is becoming increasingly recognized the influence of the microbe on many aspects of host physiology and diseases, but whether/how the host affects their symbionts is poorly characterized. Here, we reported that the host acts as a critical factor to shape the lifestyle of their symbionts in the Drosophila and bacteria model system. First, we observe that Drosophila larvae play a pivotal role in competing with pathogenic symbionts in the co-existing niche. More specifically, host larvae antagonize symbionts by deconstructing the surface slick, preventing outgrowth and antagonizing the pathogenicity of S. marcescens. Furthermore, Drosophila larvae cause the shift in the transcriptomic profile of S. marcescens, characterized with the upregulated expression of genes related to bacterial proliferation and growth and the downregulated expression of genes related to bacterial pathogenicity. More importantly, advances in bacterial single-cell RNA sequencing provide opportunities to reveal transcriptional variation, including toxic factors, across individual cells and a subpopulation clustering of isogenic bacterial populations. Finally, we found that AMPs from larvae recapitulated the response of S. marcescens to the presence of Drosophila larvae. Altogether, these findings provide an insight into the pivotal roles of the host in influencing the potential pathogens' lifecycle switching from commensalism to pathogenicity, opening the door to a better understanding of the ecological relationships between the host and microbe.

2024-01-17 | GSE232484 | GEO

The Host Modulates Transcriptional Profile and Phenotypic Heterogeneity in Symbionts.

2024-01-17 | GSE232120 | GEO

Characterization functional of AcoN-like negative regulator protein from Acetoin cluster in Acinetobacter spp. Strains

Project description:Studies of expression of mechanims of defense of the Acinetobacter sp.5-2Ac.02 from airborne hospital environment under stress conditions, such as SOS response (ROS response, heavy metals resistant mechanisms, peptides), as well as Quorum network (acetoin cluster and aromatics biodegradation cluster). Characterization functional of AcoN-like as negative regulator protein from acetoin cluster in Acinetobacter spp. Strains

2019-07-16 | GSE120392 | GEO

Chlamydial symbionts in dictyostelids

Project description:Chlamydial symbionts in dictyostelids

| PRJEB79376 | ENA

Systematic discovery of bacterial symbionts in rumen ciliate protozoa

Project description:Detection of bacterial symbionts associated to ruminal protozoa

| PRJEB101973 | ENA

Dictyopharidae spp.

Project description:Amplicon-based characterization of microbial symbioses in Dictyopharidae spp.

| PRJNA685972 | ENA

Streptococcus spp., Staphylococcus spp., Escherichia spp.

Project description:Streptococcus spp., Staphylococcus spp., Escherichia spp. Raw sequence reads