Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1 mutant

ABSTRACT: RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1 mutant

PROVIDER: PRJNA527136 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8730642_1.fastq.gz	Fastqsanger.gz
	SRR8730642_2.fastq.gz	Fastqsanger.gz
	SRR8730643_1.fastq.gz	Fastqsanger.gz
	SRR8730643_2.fastq.gz	Fastqsanger.gz
	SRR8730644_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

RNA-Seq of head tissue from Drosophila melanogaster Wild Type and AdarEA mutant

Project description:We profiled gene expression in flies with and without A-to-I RNA editing (AdarEA mutant Drosophila melanogaster with a Canton-S background).

2017-01-04 | GSE86054 | GEO

RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1 mutant

Project description:We profiled gene expression in flies with and without A-to-I RNA editing (AdarEA mutant Drosophila melanogaster with a Canton-S background).

2019-03-15 | GSE128332 | GEO

mRNA-Seq of head tissue from Drosophila melanogaster

Project description:We sequenced mRNA from head tissue of females and male of Drosophila melanogaster to identify genes differentially expressed between the sexes and sex-specific alternative splicing events. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf

2010-04-08 | GSE20348 | GEO

mRNA-Seq of head tissue from Drosophila melanogaster

2010-04-08 | E-GEOD-20348 | biostudies-arrayexpress

CG7358 mutant Drosophila melanogaster sequencing

Project description:CG7358 mutant Drosophila melanogaster sequencing

| PRJNA432658 | ENA

RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1dAdar-/- mutant

Project description:Purpose: Validation of Drosophila A-to-I editing sites Methods: We collected heads of 5 day old male dAdar-/- mutant (y, Adar5G1, w)26 and wild type (w1118) flies. Poly(A)+ RNA was used to prepare RNA-seq libraries which were subsequently sequenced single-end by an Illumina GAII Results:We builded a framework to identify RNA editing events using RNA-seq data alone in Drosophila. To validate whether the identified A-to-G sites were bona fide A-to-I editing events, we performed RNA-seq for the D.melanogaster wild-type strain (w1118) and for the Adar5G1 null mutant that eliminates RNA editing. We found that our method achieved high accuracy; 98.2% of all A-to-G sites showed only adenosine in the Adar5G1 sample Conclusions: We anticipate that our method will be very effective in the future to identify RNA editing events in different species.

2012-12-20 | GSE42815 | GEO

Drosophila melanogaster

Project description:RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1dAdar-/- mutant

| PRJNA183479 | ENA

Drosophila melanogaster

Project description:RNA-Seq of head tissue from Drosophila melanogaster Wild Type and AdarEA mutant

| PRJNA340139 | ENA

RNA-Seq of head tissue from Drosophila melanogaster Wild Type and Adar5G1dAdar-/- mutant

2012-12-20 | E-GEOD-42815 | biostudies-arrayexpress

Gene expression profiling of adult Drosophila melanogaster prickle-prickle mutant brains

Project description:Study of genome-wide differential gene expression of adult Drosophila melanogaster prickle-prickle mutant brains compared to control animals.

2023-07-10 | GSE155565 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data