Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Lake Baikal summer amplicons

PROVIDER: PRJNA530071 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8837840_1.fastq.gz	Fastqsanger.gz
	SRR8837840_2.fastq.gz	Fastqsanger.gz
	SRR8837850_1.fastq.gz	Fastqsanger.gz
	SRR8837850_2.fastq.gz	Fastqsanger.gz
	SRR8837860_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 226

Similar Datasets

Comparative transcriptomics as a key to understanding the adaptation mechanisms of Baikal sculpins to the deep-water habitat

Project description:In this study, the transcriptional profiles of four deep-sea sculpin fish species (Cottoidei) are described for the first time as part of the study of the adaptation of endemic fishes to different habitats in Lake Baikal. These studies will lead to a deeper understanding of the molecular mechanisms that ensure the adaptation of endemic species to specific habitats in Lake Baikal, even at depths of more than 500 m (up to 1600 m).

2025-10-30 | GSE308109 | GEO

Putative carotenoid-binding proteins from the hemolymph of endemic Lake Baikal amphipod Eulimnogammarus cyaneus and E. vittatus

Project description:Color is an important trait in nature, playing a role in selection and speciation. The most important colorants in crustaceans are carotenoids, which in complexes with carotenoid-binding proteins provide an astonishing variety of colors from red to violet. Over 350 species and subspecies of amphipods (Crustacea: Amphipoda) endemic to Lake Baikal exhibit an impressive variability of colors and coloration patterns. However, the mechanisms forming this diversity are underexplored. In this work, we analyze the coloration of two species of endemic Lake Baikal amphipods, Eulimnogammarus cyaneus and E. vittatus. These species are brightly colored and, even more importantly, characterized by intraspecific color variability. We showed that the color of either species strongly correlated with the abundance of two putative carotenoid-binding proteins (the relative abundance of these proteins was higher in blue or teal-colored animals than in the orange- or yellow-colored ones.). With LC-MS/MS, we were able to identifiy these proteins, which turned out to be similar to the pheromone/odorant-binding protein family.

2020-06-04 | PXD018516 | Pride

Proteomes of individuals of Eulimnogammarus verrucosus collected in the field in fall-winter months

Project description:Eulimnogammarus verrucosus is a Baikal endemic species inhabiting the lake's littoral. This species is adapted to low temperatures and it reproduces during fall-winter months. To capture aspects of adaptation to winter conditions in situ, we evaluated changes in the proteomes of E. verrucosus that were collected during the fall-winter months (September, November, December, and January) and early summer (June). Moreover, the aspects of reproduction of the cold-reproducing species were traced.

2025-07-28 | PXD040677 | Pride

Chromatium okenii transcriptomics analysis

Project description:Raw RNA sequences of purple sulfur bacterium Chromatium okenii strain LaCa isolated form the chemocline of meromictic Lake Cadagno. Study involves the investigation of the differences in the gene expression level between two different times of the summer season (July vs September), during the day and at night.

2023-06-30 | E-MTAB-13107 | biostudies-arrayexpress

freshwater metagenome

Project description:Lake Baikal Metagenome

| PRJNA203521 | ENA

lake water metagenome

Project description:Lake Baikal Metagenome

| PRJNA396997 | ENA

Lake Baikal Metagenomes

Project description:Lake Baikal Metagenomes obtained from epipelagic, mesopelagic and bathypelagic zones in winter and summer.

| PRJEB37526 | ENA

Project description:Lake Baikal summer metagenomes from 5, 20, 300, 390, 1250 and 1350 m of depth

| PRJNA615165 | ENA