Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: The temperature-dependent viral resistance in Capsicum annuum

PROVIDER: PRJNA542009 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9031280.fastq.gz	Fastqsanger.gz
	SRR9031280_1.fastq.gz	Fastqsanger.gz
	SRR9031280_2.fastq.gz	Fastqsanger.gz
	SRR9031290.fastq.gz	Fastqsanger.gz
	SRR9031290_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Expression data from Capsicum annuum inoculated with Fusarium oxysporum Fo47

Project description:The colonization of Capsicum annuum roots by Fusarium oxysporum Fo47 induces resistance responses on the plant. Fo47 is a non-pathogenic strain of Fusarium oxysporum. Fo47 colonizes only the most outer layers of the root surface but it does not colonize inner tissues. Pre-treatment of roots with Fo47 reduces the symptom development produced by later pathogen inoculation. The expression of genes in distal tissues was determined by microarray analysis of stems of Fo47-treated plants. Capsicum annuum samples were analyzed using Affymetrix chips of the close-related species Solanum lycopersicum.

2021-06-02 | GSE49432 | GEO

Chiltepin pepper RNA-Seq data of two fruit development stages

Project description:Two fruit development stages of the wild chiltepin pepper (Capsicum annuum var. glabriusculum) were studied. RNA-Seq data was obtained from fruits at 20 and 68 days after anthesis with two biological replicates for a total of 4 samples. 260 million raw reads were sequenced and over 80% of them mapped back to the Capsicum annuum genome.

2021-08-05 | GSE171889 | GEO

Solanaceae comparative gene expression profiling

Project description:Six different Solanaceae species, Potato (Solanum tuberosum), Tomato (Lycopersicum esculentum), Pepper (Capsicum annuum), Tobacco (Nicotiana tabacum), Petunia and Nicotiana benthamiana were grown at 25C, 16h light and 8h darkness. Mature leaves were harvested after 4-6 weeks. RNA was isolated using Qiagen RNeasy. Tomato, pepper, petunia tobacco and N. benthamiana samples were hybridized against potato samples. Keywords: Direct comaprison

2007-09-01 | GSE8234 | GEO

Identification and expression profiling of Helicoverpa armigera microRNAs and their possible role in the regulation of digestive protease genes

Project description:Using Illumina platform, deep sequencing of 12 small RNA libraries was performed from Helicoverpa armigera larvae fed on artificial diet (AD) or recombinant Capsicum annuum PI-7 (rCanPI-7) incorporated diet at various time intervals (0.5, 2, 6, 12, 24, and 48h). Several candidate miRNAs (conserved and novel) were differentially expressed in rCanPI-7 fed larvae as compared to the larvae fed on AD. The investigation revealed potential roles of miRNAs in H. armigera protease gene regulation.

2017-09-15 | GSE61503 | GEO

Chili pepper RNA-Seq data for fruit development in a set of accessions

Project description:Twelve chili pepper accessions, six domesticated, four wild and two F1 crosses were studied. RNA-Seq experiments were performed with fruits from each accession at 7 different times after anthesis. Additionally, samples of seedlings from two accessions were evaluated. The data set is comprised by 179 samples, that in total have more than 3 billion reads map to the Capsicum annuum genome.

2021-03-16 | GSE165448 | GEO

Solanaceae comparative gene expression profiling

Project description:Six different Solanaceae species, Potato (Solanum tubersosum), Tomato (Lycopersicum esculentum), Pepper (Capsicum annuum), Tobacco (Nicotiana tabaccum), Petunia and Nicotiana benthiamana were grown at 25C, 16h light and 8h darkness. Mature leaves were harvested after 4-6 weeks. RNA was isolated using Qiagen RNeasy. Tomato, pepper, petunia, tobacco and N. benthamiana samples were hybridized against potato samples. Keywords: Solanaceae comparative gene expression profiling

2005-10-03 | GSE3380 | GEO

Project description:Capsicum annuum Transcriptome

| PRJNA670818 | ENA

Project description:Capsicum annuum transcriptome

| PRJNA1046557 | ENA

Capsicum annuum

Project description:Capsicum annuum Map

| PRJNA29341 | ENA

Capsicum annuum

Project description:Capsicum annuum Map

| PRJNA162723 | ENA