Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fungus

ABSTRACT: Perturbation of the Gut Fungal Microbiota in Patients with Newly Diagnosed or Untreated Rheumatoid Arthritis Raw sequence reads

PROVIDER: PRJNA560746 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11845200_1.fastq.gz	Fastqsanger.gz
	SRR11845200_2.fastq.gz	Fastqsanger.gz
	SRR11845300_1.fastq.gz	Fastqsanger.gz
	SRR11845300_2.fastq.gz	Fastqsanger.gz
	SRR11845201_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 332

Similar Datasets

RNAseq analysis of human neutrophils from people with rheumatoid arthritis

Project description:We report gene expression profiles of blood neutrophils from (1) people newly-diagnosed with rheumatoid arthritis (early RA) before commencement of disease-modifying anti-rheumatic drug therapy, (2) DMARD-refractory RA (severe RA) before commencement of anti-TNF therapy and (3) healthy controls.

2025-05-14 | GSE274598 | GEO

Gut Microbiota and Bacterial Translocation participate in Chronic Systemic Inflammation in Rheumatoid Arthritis patients

Project description:Application of a mass spectrometry -based approach to investigate if bacterial translocation from gut microbiota could take part in the chronic inflammation observed in Rheumatoid Arthritis patients

2025-05-06 | PXD045023 | Pride

Disease activity drives transcriptomic heterogeneity in early untreated rheumatoid synovitis

Project description:The purpose of this study was to investigate the transcriptomic heterogeneity in synovial tissue of early untreated rheumatoid arthritis patients in association with clinical data

2023-05-31 | GSE225731 | GEO

Project description:Gut microbiota in rheumatoid arthritis patients

| PRJNA1006563 | ENA

Effect of Schisandrin on Rheumatoid Synovial Fibroblast-like Synoviocytes

Project description:To explore how Schisandrin (SCH) regulates biological functions of fibroblast-like synovioctyes (FLSs) from rheumatoid arthritis (RA) patients, we evaluated the transcriptome of SCH-treated RA FLSs compared with untreated control using RNA sequencing analysis.

2023-06-09 | GSE205795 | GEO

Effect of Nitidine Chloride on Rheumatoid Synovial Fibroblast-like Synoviocytes

Project description:To explore how nitidine chloride (NC) regulates biological functions of fibroblast-like synovioctyes (FLSs) from rheumatoid arthritis (RA) patients, we evaluated the transcriptome of NC-treated RA FLSs compared with untreated control using RNA sequencing analysis.

2021-10-06 | GSE185040 | GEO

Differential DNA methylation in Rheumatoid arthritis

Project description:Genome-wide DNA methylation level was studied to determine whether Rheumatoid arthritis patients (cases) has methylation differences comparing to normal controls in PBLs. We used Illumina HumanMethylation450 BeadChip array to determine the genome-wide DNA methylation difference in PBLs from Rheumatoid arthritis patients (cases) and normal controls Bisulphite converted DNA from the Rheumatoid arthritis patients (cases) and normal controls were hybridized to the Illumina Illumina HumanMethylation450 BeadChip arrays

2013-01-21 | E-GEOD-42861 | biostudies-arrayexpress

Project description:diversity of gut microbiota in rheumatoid arthritis patients

| PRJNA646930 | ENA

Project description:Gut microbiota in Vietnamese patients with rheumatoid arthritis

| PRJNA1295194 | ENA

Transcription profiling of human synovial samples from patients with osteoarthritis, rheumatoid arthritis vs controls treated with various drug regimes to characterise RA at the molecular level and to uncover key pathomechanisms

Project description:Rheumatoid arthritis (RA) is a chronic, inflammatory joint disease of unknown etiology and pronounced inter-patient heterogeneity. To characterize RA at the molecular level and to uncover key pathomechanisms, we performed whole-genome gene expression analyses. Synovial tissues from rheumatoid arthritis patients were compared to those from osteoarthritis patients and to normal donors. Keywords: disease state analysis Two disease conditions (rheumatoid arthritis and osteoarthritis) in comparison to normal donors were investigated. For the two disease groups samples derived from three individual patients and two pools of patients were hybridised.

2004-11-04 | E-GEOD-1919 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data