Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rhizosphere soil

ABSTRACT: Diazotrophic Paenibacillus beijingensis BJ-18 restructures the bacterial community structure of wheat (Triticum aestivum L.) rhizosphere

PROVIDER: PRJNA561273 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10009507_1.fastq.gz	Fastqsanger.gz
	SRR10009507_2.fastq.gz	Fastqsanger.gz
	SRR10009508_1.fastq.gz	Fastqsanger.gz
	SRR10009508_2.fastq.gz	Fastqsanger.gz
	SRR10009509_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Wheat Freeze-Tolerance

Project description:Comparison of gene expression levels in non-hardened (NH), cold-hardened (CH) and subzero-hardened (SZH) Triticum aestivum L. cv Jackson crowns with Affymetrix GeneChip Barley Genome Array. Keywords = wheat Keywords = crowns Keywords = cold tolerance Keywords = freezing resistance Keywords = Triticum aestivum L. cv Jackson Keywords: repeat sample

2005-01-20 | GSE2166 | GEO

Transcriptional analyses of wheat responses to the necrotrophic effector SnTox3

Project description:Wheat (Triticum aestivum) was infiltrated with the Stagonospora nodorum effector protein SnTox3 to identify differentially regulated genes.

2014-07-25 | GSE59723 | GEO

RNA-seq analysis of bread wheat grown under hydroponic Fe deficient conditions

Project description:Bread wheat (Triticum aestivum L., cv. Fielder) plants were grown under iron (Fe) deficient hydroponic conditions to analyise transcriptomic changes in leaf and root tissue.

2024-12-11 | GSE283676 | GEO

Wheat transcriptomic changes in response to Trichoderma harzianum and/or nitrogen supplies

Project description:We used microarrays to detail the Triticum aestivum response to T34 in the presence of different CN concentrations as nitrogen source. Affymdetrix wheat genome array (platform GPL3802) was used.

2022-07-25 | GSE134903 | GEO

Wheat phosphoproteome Raw Data

Project description:Phosphopeptide abundances in wheat (Triticum aestivum L.). Data were obtained from three independent biological replicates.

2026-04-21 | PXD074297 | JPOST Repository

A circadian transcriptional sub-network and EARLY FLOWERING 3 control timing of senescence and grain nutrition in bread wheat

Project description:Bread wheat (Triticum aestivum cv. Mace) mature and senescent flag leaves were collected over a 48 h time course in continuous conditions to investigate changes in circadian clock regulation that occur during leaf senescence.

2024-02-27 | GSE259431 | GEO

rhizosphere soil

Project description:Diazotrophic Paenibacillus beijingensis drives fungal community variation in the rhizosphere of maize

| PRJNA560737 | ENA

Transcriptome analysis of the response of domesticated emmer wheat (Triticum turgidum subsp. dicoccum) to single vs. mixed infections with Zymosptoria tritici and Puccinia graminis

Project description:Tetraploid emmer Triticum turgidum subsp. dicoccum is one of the first wheat species to be domesticated. Emmer shares many pathogen species with modern durum wheat (Triticum turgidum subsp. durum) and hexaploid bread wheat (Triticum aestivum L.). Domesticated emmer is considered a highly valuable source of potentially novel disease resistance genes that can be introduced into modern wheat varieties, however, large gaps remain in our understanding of the basic immune responses of emmer to the most common wheat pathogens. In this work we describe the transcriptional response of emmer to single and mixed pathogen species infections with the ascomycete Zymoseptoria tritici, and the basidiomycete Puccinia graminis. In doing so, we here uncover unique patterns in the response of emmer to a more complex pathogen population with mixed species infections.

2026-02-24 | GSE319827 | GEO

Light effect on the hormonal and transcriptional status of winter and spring wheat plants during cold hardening

Project description:The effect of light during the development of freezing tolerance was studied in winter wheat (Triticum aestivum L. var. Mv Emese) and spring wheat variety Nadro. Ten-day-old plants were cold hardened at 5°C for 12 days either under normal (250 mmol m-2 s-1) or low light (20 mmol m-2 s-1) conditions.

2012-01-31 | GSE29640 | GEO

The effect of cold and hydrogen peroxide in wheat.

Project description:One day cold (14 and 19 °C) and hydrogen peroxide (H2O2) treatment of wheat (Triticum aestivum ssp. aestivum L.) variety Chinese Spring and two chromosome 5A substitution lines of Chinese Spring, Chinese Spring(T. ae. ssp. aestivum L. Cheyenne 5A) and Chinese Spring(T. ae. ssp. spelta L. 5A).

2018-09-28 | E-MTAB-6627 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data