Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: A Single-Cell Transcriptome Atlas for Zebrafish Development

PROVIDER: PRJNA564810 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10095964_1.fastq.gz	Fastqsanger.gz
	SRR10095964_2.fastq.gz	Fastqsanger.gz
	SRR10095965_1.fastq.gz	Fastqsanger.gz
	SRR10095965_2.fastq.gz	Fastqsanger.gz
	SRR10095966_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

A single-cell transcriptome atlas of the zebrafish telencephalon

Project description:A single-cell transcriptome atlas of the zebrafish telencephalon

| PRJNA875033 | ENA

Project description:Time-resolved single-cell Multiomic zebrafish atlas

| PRJNA1164307 | ENA

A single cell transcriptome atlas of the developing zebrafish hindbrain

Project description:A single cell transcriptome atlas of the developing zebrafish hindbrain

| PRJNA593433 | ENA

Single-cell transcriptome atlas of human retinal organoid development

Project description:Single-cell transcriptome atlas of human retinal organoid development

| PRJEB60391 | ENA

A single cell transcriptome atlas of the developing zebrafish hindbrain [Fgf20a]

Project description:A single cell transcriptome atlas of the developing zebrafish hindbrain [Fgf20a]

| PRJNA593444 | ENA

A single cell transcriptome atlas of the developing zebrafish hindbrain [fgfr1]

Project description:A single cell transcriptome atlas of the developing zebrafish hindbrain [fgfr1]

| PRJNA593443 | ENA

A Single Cell Atlas of Alveolar Development

Project description:A Single Cell Atlas of Alveolar Development

| PRJNA693167 | ENA

Mapping the zebrafish developmental and aging atlas by single cell mRNA-seq

Project description:Single-cell mRNA sequencing (scRNA-seq) technologies are reshaping current cell-type classification system. In previous studies, we constructed the Mouse Cell Atlas (MCA) and Human Cell Landscape (HCL) to catalog all cell types by collecting scRNA-seq data. Howerver, the systematic study for organism-level dynamic changes of cellular states across zebrafish life span are still lacking. Here, we constructed the zebrafish cell Landscape covering different development periods using Microwell-seq protocol. The zebrafish cell landscape provides a valuable resource for studying cross-sepciess development, maturation and aging.

2022-07-23 | GSE198571 | GEO

Single-cell analysis of shared signatures and transcriptional diversity during zebrafish development

Project description:We generated an atlas of 489,686 single-cell transcriptomes from 62 closely spaced developmental stages spanning the first 5 days of zebrafish development, encompassing the first transcriptional events after zygotic genome activation to a freely-swimming, feeding animal.

2023-03-22 | GSE223922 | GEO

Construction the adult Drosophila cell atlas at single cell resolution

Project description:Single-cell mRNA sequencing (mRNA-seq) technologies are reshaping the current cell-type classification system. In previous studies, we built the mouse cell atlas (MCA) and human cell landscape (HCL) to catalog all cell types by collecting scRNA-seq data. However, systematically study for zebrafish (Danio rerio) and fruit fly (Drosophila melanogaster) are still lacking. Here, we construct the zebrafish and Drosophila cell atlas with Microwell-seq protocols, which provides valuable resources for characterization of diverse cell populations of zebrafish and Drosophila, and studying difference between vertebrates and Invertebrates at single cell level.

2022-07-08 | GSE178149 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data