Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome profiling of WM3248 melanoma cells following PGC1-alpha knockdown

ABSTRACT: Transcriptome profiling of WM3248 melanoma cells following PGC1-alpha knockdown

PROVIDER: PRJNA606044 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11067676.fastq.gz	Fastqsanger.gz
	SRR11067677.fastq.gz	Fastqsanger.gz
	SRR11067678.fastq.gz	Fastqsanger.gz
	SRR11067679.fastq.gz	Fastqsanger.gz
	SRR11067680.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Transcriptome profiling of WM3248 melanoma cells following PGC1-alpha knockdown

Project description:PGC1-alpha is a transcriptional coactivator that controls diverse cellular processes, including metabolism. PGC1-alpha expression is increased in invasive primary melanoma. To understand the role of PGC1-alpha in the invasive growth of primary melanoma, we generated transcriptional (RNA-Seq) profiles of WM3248 primary melanoma cells that were transfected with either negative control or PGC1-alpha siRNA.

2020-02-12 | GSE145101 | GEO

Transcriptome profiling of A375SM melanoma cells following PRAME and BAP1 knockdown

Project description:To investigate the transcriptomic changes associated with PRAME and BAP1 knockdown, RNA-seq was performed on A375SM melanoma cells stably expressing shRNA targeting PRAME (shPRAME), BAP1 (shBAP1), or a non-targeting control (shEmpty). This study aims to understand the role of PRAME and BAP1 in gene regulation and melanoma progression.

2025-09-02 | GSE306132 | GEO

YAP1/TAZ knockdown in melanoma

Project description:YAP1/TAZ knockdown in melanoma

| PRJNA1081396 | ENA

RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown

Project description:RNA-seq analysis of SKMEL28 melanoma cells following DIRC3 and IGFBP5 ASO knockdown

| PRJNA531445 | ENA

Gene expression profiling following the overexpression or the knockdown of Ambra1 in A375 melanoma cell lines

Project description:Gene expression profiling following the overexpression or the knockdown of Ambra1 in A375 melanoma cell lines

| PRJNA732077 | ENA

Transcriptome profiling following knockdown of NAA50 in Arabidopsis

Project description:Transcriptome profiling following knockdown of NAA50 in Arabidopsis

| PRJNA607603 | ENA

Transcriptional profiling following knockdown of RNA binding proteins

Project description:Transcriptional profiling following knockdown of RNA binding proteins

| PRJNA642291 | ENA

Gene expression profiling following the overexpression or the knockdown of Ambra1 in A375 melanoma cell lines

Project description:Melanoma is the most deadly type of skin cancers and, there is a continuous need to develop early biomarkers as well as treatments to improve the survivability of patients. Ambra1 is an essential regulator in autophagy and it has been recently shown to have a role in cell proliferation. We used microarrays to analyse the transcriptomic changesi n A375 melanoma cell lines following Ambra1 differential expression

2021-05-23 | GSE175361 | GEO

Gene expression profiling of mouse macrophages following IRF2 knockdown

Project description:Gene expression profiling of mouse macrophages following IRF2 knockdown

| PRJNA418340 | ENA

Expression profiling by high-throughput RNA-sequencing following PGC1β and ERRα knockdown in HCT116 cells

Project description:The goal of this experiment was to determine differential gene regulation of PGC1 or ERR compared to the control.

2020-04-02 | GSE147905 | GEO