Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Vitis quinquangularis

ABSTRACT: Vitis quinquangularis overview

PROVIDER: PRJNA607139 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11103278.fastq.gz	Fastqsanger.gz
	SRR11103279.fastq.gz	Fastqsanger.gz
	SRR11103280.fastq.gz	Fastqsanger.gz
	SRR11103281.fastq.gz	Fastqsanger.gz
	SRR11103282.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 32

Similar Datasets

Vitis quinquangularis

Project description:Vitis quinquangularis Raw sequence reads

| PRJNA859260 | ENA

Vitis quinquangularis cultivar:Shang-24

Project description:Transcriptome of Vitis quinquangularis S

| PRJNA269987 | ENA

Vitis quinquangularis strain:Shang-24

Project description:Vitis quinquangularis strain:Shang-24 Transcriptome or Gene expression

| PRJNA607103 | ENA

Grape skin transcriptome to reveal genes related with resveratrol accumulation

Project description:Methods:transcriptomes of the different development stages of Vitis vinifera cv. Cabernet Sauvignon and Vitis quinquangularis accession Danfeng-2 were analyzed using Illumina Hiseq 2500. The sequence reads that passed quality filters were analyzed: TopHat followed by Cufflinks. mRNA profiles of different development stages of Vitis vinifera cv. Cabernet Sauvignon and Vitis quinquangularis accession Danfeng-2 were generated by deep sequencing, in triplicate, using Illumina Hiseq 2500.

2015-12-23 | E-GEOD-76256 | biostudies-arrayexpress

Grape skin transcriptome to reveal genes related with resveratrol accumulation

2015-12-23 | GSE76256 | GEO

Vitis quinquangularis

Project description:Transcriptome of grape leaves inoculated with powdery mildew.

| PRJNA698051 | ENA

Characterization of Erysiphe necator-responsive genes in Chinese Wild Vitis quinquangularis.

Project description:Powdery mildew (PM), caused by fungus Erysiphe necator, is one of the most devastating diseases of grapevine. To better understand grapevine-PM interaction and provide candidate resources for grapevine breeding, a suppression subtractive hybridization (SSH) cDNA library was constructed from E. necator-infected leaves of a resistant Chinese wild Vitis quinquangularis clone "Shang-24". A total of 492 high quality expressed sequence tags (ESTs) were obtained and assembled into 266 unigenes. Gene ontology (GO) analysis indicated that 188 unigenes could be assigned with at least one GO term in the biological process category, and 176 in the molecular function category. Sequence analysis showed that a large number of these genes were homologous to those involved in defense responses. Genes involved in metabolism, photosynthesis, transport and signal transduction were also enriched in the library. Expression analysis of 13 selected genes by qRT-PCR revealed that most were induced more quickly and intensely in the resistant material "Shang-24" than in the sensitive V. pseudoreticulata clone "Hunan-1" by E. necator infection. The ESTs reported here provide new clues to understand the disease-resistance mechanism in Chinese wild grapevine species and may enable us to investigate E. necator-responsive genes involved in PM resistance in grapevine germplasm.

| S-EPMC3472759 | biostudies-literature

Vitis

Project description:Vitis Organism overview

| PRJNA160839 | ENA

Vitis vinifera x Vitis amurensis

Project description:Vitis vinifera x Vitis amurensis overview

| PRJNA1197061 | ENA

Vitis vinifera x Vitis labrusca

Project description:Vitis vinifera x Vitis labrusca overview

| PRJNA791103 | ENA