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Fusarium xylarioides

ABSTRACT: Historical genomics reveals the evolutionary mechanisms behind multiple outbreaks of the host-specific coffee wilt pathogen Fusarium xylarioides

PROVIDER: PRJNA659227 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR12534411_1.fastq.gz	Fastqsanger.gz
	SRR12534411_2.fastq.gz	Fastqsanger.gz
	SRR12534412_1.fastq.gz	Fastqsanger.gz
	SRR12534412_2.fastq.gz	Fastqsanger.gz

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Fusarium xylarioides

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Comparative O-glycoproteomics of Fusarium oxysporum

Project description:Fusarium oxysporum causes Fusarium wilt syndrome in more than 120 different plant hosts, including globally important crops such as tomato, cotton, banana, melon, etc. F. oxysporum shows high host specificity in over 150 formae speciales and have been ranked in the top 10 plant fungal pathogens. Although three PMTs encoded by the pmt1, pmt2, and pmt4 are annotated in the genome of F. oxysporum, their functions have not been reported. As O-mannosylation is not found in plants, a comprehensive understanding of PMTs in F. oxysporum becomes attractive for the development of new strategy against Fusarium wilt. In order to understand the molecular mechanism of the differential functions of three PMTs, a comparative O-glycoproteome analysis of the pmt mutants were carried out.

2019-10-28 | PXD012530 | Pride

Discovery and Differential Expression of miRNAs in Fusarium Wilt Resistant and Susceptible Banana Varieties

Project description:MicroRNAs (miRNAs) are a class of endogenous non-coding small RNAs that regulate targeted mRNAs by degrading or repressing translation, considered as post-transcrption regulators. So far, a large number of miRNAs have been discovered in model plants, but little information is available on miRNAs in banana. In this study, by sequencing the small RNA (sRNA) transcriptomes of Fusarium wilt resistant and susceptible banana varieties, 139 members in 38 miRNA families were discovered, and six out of eight new miRNAs were confirmed by RT-PCR. According to the analysis of sRNA transcriptome data and qRT-PCR verification, some miRNAs were differentially expressed between Fusarium wilt resistant and susceptible banana varieties. Two hundred and ninety-nine and 31 target genes were predicted based on the draft maps of banana B genome and Fusarium oxysporum (FOC1, FOC4) genomes respectively. Specifically, two important pathogenic genes in Fusarium oxysporum genomes, feruloyl esterase gene and proline iminopeptidase gene, were targeted by banana miRNAs. These novel findings may provide a new strategy for the prevention and control of Fusarium wilt in banana.

2016-10-14 | GSE74005 | GEO

Fusarium xylarioides strain:KSU18978

Project description:Draft genome of Fusarium xylarioides

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infected root time course

Project description:Time course of fusarium wilt infection of cotton root tissues Keywords = cotton, Fusarium wilt, AtsC, virulence, in planta expressed genes Keywords: other

2005-04-21 | GSE2544 | GEO

Infected hypocotyl time course

Project description:Time course of Fusarium wilt infection of cotton hypocotyl tissues Keywords = cotton, Fusarium wilt, AtsC, virulence, in planta expressed genes Keywords: other

2005-04-21 | GSE2543 | GEO

Fusarium xylarioides strain:K1

Project description:Fusarium xylarioides strain:K1 Genome sequencing and assembly

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Project description:Horizontal transfers between fungal Fusarium species contributed to successive outbreaks of coffee wilt disease

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Maize gene expression during infection with Fusarium moniliforme

Project description:The fungal pathogen Fusarium moniliforme causes ear rot in maize. Ear rot in maize is a destructive disease globally caused by Fusarium moniliforme , due to decrease of grain yield and increase of risks in raising livestock by mycotoxins production. Plants have developed various defense pathways to cope with pathogens. We used microarrays to detail the global programme of gene expression during the infection process of Fusarium moniliforme in its host plant to get insights into the defense programs and the host processes potentially involved in plant defense against this pathogen.

2009-12-16 | GSE19501 | GEO

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Project description:Time course of Fusarium wilt infection of cotton hypocotyl tissues Keywords = cotton, Fusarium wilt, AtsC, virulence, in planta expressed genes

2010-06-10 | E-GEOD-2543 | biostudies-arrayexpress

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