Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Plasma small RNA-Seq profile of healthy subjects with different dietary habits

ABSTRACT: Plasma small RNA-Seq profile of healthy subjects with different dietary habits

PROVIDER: PRJNA672038 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12899300.fastq.gz	Fastqsanger.gz
	SRR12899301.fastq.gz	Fastqsanger.gz
	SRR12899302.fastq.gz	Fastqsanger.gz
	SRR12899303.fastq.gz	Fastqsanger.gz
	SRR12899304.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 120

Similar Datasets

Plasma small RNA-Seq profile of healthy subjects with different dietary habits

Project description:Small RNA-Seq analysis of circulating small RNAs performed on plasma samples from an Italian cohort of 120 healthy individuals with three dietary habits. The cohort includes 72 women and 48 men included an equal proportion of vegetarians, vegans and omnivores.

2020-11-17 | GSE160130 | GEO

Stool small RNA-Seq profile of healthy subjects with different dietary habits

Project description:Small RNA-Seq analysis of on stool samples from an Italian cohort of 120 healthy individuals with three dietary habits. The cohort includes 72 women and 48 men included an equal proportion of vegetarians, vegans and omnivores.

2021-07-30 | GSE171913 | GEO

Stool small RNA-Seq profile of healthy subjects with different dietary habits

Project description:Stool small RNA-Seq profile of healthy subjects with different dietary habits

| PRJNA721390 | ENA

DNA methylation profiling of healthy elderly individuals with different lifestyle habits

Project description:Illumina Infinium EPIC HumanMethylation BeadChip data from saliva DNA samples from a healthy elderly cohort with individuals in the age range 70-95 in Southwest Sweden. The cohort was stratified into study groups based on participants´answers to a questionnaire of different lifestyle factors including vitamin supplementations, smoking and drinking habits, physical activity (per year), sun exposure and eating habits. Vitamin D intake was evaluated from the vitamin D supplementation (alone or in a multivitamin complex), dietary vitamin D intake (fish and seafood frequency) and vitamin D synthesis in the skin (sunlight exposure and use of sunscreen). Differential methylation analysis was performed for all the study groups and the combination of different factors with vitamin D supplementation. Gender, age, smoking and alcohol (SD and frequency) were used as covariates in the analyses. Only the study groups referred to the conclusions of the study are shown.

2022-07-23 | E-MTAB-11445 | biostudies-arrayexpress

Lifestyle and Dietary Habits Affect Plasma Levels of Specific Cytokines in Healthy Subjects.

Project description:Low-grade chronic inflammation (LGCI) is a common feature of non-communicable diseases. Cytokines play a crucial role in LGCI. This study aimed to assess how LGCI risk factors [e.g., age, body mass index (BMI), smoke, physical activity, and diet] may impact on specific cytokine levels in a healthy population. In total, 150 healthy volunteers were recruited and subjected to questionnaires about the last 7-day lifestyle, including smoking habit, physical activity, and food frequency. A panel of circulating cytokines, chemokines, and growth factors was analyzed by multiplex ELISA. BMI showed the heaviest impact on the correlation between LGCI-related risk factors and cytokines and was significantly associated with CRP levels. Aging was characterized by an increase in IL-1b, eotaxin, MCP-1, and MIP-1α. Smoking was related to higher levels of IL-1b and CCL5/RANTES, while physical activity was related to MIP-1α. Within the different eating habits, CRP levels were modulated by eggs, red meat, shelled fruits, and greens consumption; however, these associations were not confirmed in a multivariate model after adjusting for BMI. Nevertheless, red meat consumption was associated with an inflammatory pattern, characterized by an increase in IL-6 and IL-8. IL-8 levels were also increased with the frequent intake of sweets, while a higher intake of shelled fruits correlated with lower levels of IL-6. Moreover, IL-6 and IL-8 formed a cluster that also included IL-1b and TNF-α. In conclusion, age, BMI, smoke, physical activity, and dietary habits are associated with specific cytokines that may represent potential markers for LGCI.

| S-EPMC9270017 | biostudies-literature

Proteomic investigation of organic residues from ancient Baħrija pottery reveals dietary habits during Maltese Bronze Age

Project description:The impressive increase of performance and versatility of the MS-instrumentation, which today represents an indispensable tool in proteomics, has determined a considerable growth of the so-called paleoproteomics as interdisciplinary approach, which involve chemists, archaeologists, and evolutionary biologists. Archaeological proteins residues can inform us about production, use, state and preservation of a material, about evolutionary and ecological divergences, dietary habits and past cultures. This paper reports the results of the characterization of proteins extracted from the pottery of the Maltese site of Baħrija, the guide-site for the local Iron Age (11th-8th century BCE). Proteomic data here reported confirm that one the major issue of these kind of studies is represented by contamination of animal and human agents that may complicate endogenous protein identification and authentication. In this context, the lack of archaeozoological and paleobotanical data for the settlement at Baħrija makes the outcomes of the proteomic analysis even more relevant in terms of contributing to reconstruction foodways and dietary habits of that ancient community. Particularly, our data revealed that wheat turned out to be a cereal used in the diet of the ancient community of Bahrija.

2021-02-25 | PXD022848 | Pride

Extracellular RNA profiling of serum, plasma, and urine of healthy subjects

Project description:Extracellular RNA profiling of serum, plasma, and urine of healthy subjects

| PRJNA878918 | ENA

Extracellular RNA profiling of serum, plasma, and urine of healthy subjects

Project description:Extracellular RNA profiling of serum, plasma, and urine of healthy subjects

| PRJNA878917 | ENA

Impact of dietary habits on the gut microbiome and resistome

Project description:Limited impact of dietary habits on the gut microbiome and resistome of humans

| PRJEB46230 | ENA

Small RNA-Seq of plasma-derived exosomes from Acute Respiratory Distress Syndrome patients and healthy subjects

Project description:Despite a significant progress in the treatment of Acute Respiratory Distress Syndrome (ARDS), our ability to identify early patients and predict outcome remains limited. In this study, we aimed to characterize small RNA content of plasma exosomes from ARDS patients in order to identify potential diagnostic biomarkers of the disease. For the first time, we profiled miRNA expression levels in plasma-derived exosomes from ARDS patients (n=8) compared to healthy subjects (n=10) by small RNA-seq. It allowed us to identify 12 exosomal miRNAs differentially expressed in ARDS context (padj<0.05).

2021-01-19 | E-MTAB-9991 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data