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Autographa californica multiple nucleopolyhedrovirus

ABSTRACT: Autographa californica MNPV overview

PROVIDER: PRJNA69553 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1119940_1.fastq.gz	Fastqsanger.gz
	SRR1119940_2.fastq.gz	Fastqsanger.gz
	SRR1118212_1.fastq.gz	Fastqsanger.gz
	SRR1118212_2.fastq.gz	Fastqsanger.gz
	SRR1119903_1.fastq.gz	Fastqsanger.gz

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Autographa californica multiple nucleopolyhedrovirus

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Comprehensive analysis of host gene expression in Autographa californica nucleopolyhedrovirus-infected Spodoptera frugiperda cells

Project description:Autographa californica multicapsid nucleopolyhedrovirus (AcMNPV) is the best-studied baculovirus and most commonly used virus vector for baculovirus expression vector systems. The effect of AcMNPV infection on host cells is incompletely understood. A microarray based on Spodoptera frugiperda ESTs was used to investigate the impact of AcMNPV on host gene expression in cultured S. frugiperda, Sf21 cells. Most host genes were down-regulated over the time course of infection, although a small number were up-regulated. The most highly up-regulated genes encoded heat shock protein 70s and several poorly characterized proteins. Regulated genes with the highest score identified by functional annotation clustering included primarily products required for protein expression and trafficking in the ER and golgi. All were significantly down-regulated by approximately 12h post-infection. Microarray data were validated by qRT-PCR. This study provides the first comprehensive host transcriptome overview of Sf21 cells during AcMNPV infection.

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Spodoptera frugiperda and Autographa californica Multiple Nucleopolyhedrovirus

Project description:Comparison between transcriptome of Spodoptera frugiperda (Sf9) cells and Autographa californica Multiple Nucleopolyhedrovirus-infected Sf9 cells Raw sequence reads

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Autographa californica multiple nucleopolyhedrovirus ac76 is involved in intranuclear microvesicle formation.

Project description:In this study, we characterized Autographa californica multiple nucleopolyhedrovirus (AcMNPV) orf76 (ac76), which is a highly conserved gene of unknown function in lepidopteran baculoviruses. Transcriptional analysis of ac76 revealed that transcription of multiple overlapping multicistronic transcripts initiates from a canonical TAAG late-transcription start motif but terminates at different 3' ends at 24 h postinfection in AcMNPV-infected Sf9 cells. To investigate the role of ac76 in the baculovirus life cycle, an ac76-knockout virus was constructed using an AcMNPV bacmid system. Microscopy, titration assays, and Western blot analysis demonstrated that the resulting ac76-knockout virus was unable to produce budded viruses. Quantitative real-time PCR analysis demonstrated that ac76 deletion did not affect viral DNA synthesis. Electron microscopy showed that virus-induced intranuclear microvesicles as well as occlusion-derived virions were never observed in cells transfected with the ac76-knockout virus. Confocal microscopy analysis revealed that Ac76 was predominantly localized to the ring zone of nuclei during the late phase of infection. This suggests that ac76 plays a role in intranuclear microvesicle formation. To the best of our knowledge, this is the first baculovirus gene identified to be involved in intranuclear microvesicle formation.

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