Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Proposal of Kathroperlidae and phylogenomics of the Paraperlinae

PROVIDER: PRJNA702544 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13743951_1.fastq.gz	Fastqsanger.gz
	SRR13743951_2.fastq.gz	Fastqsanger.gz
	SRR13743952_1.fastq.gz	Fastqsanger.gz
	SRR13743952_2.fastq.gz	Fastqsanger.gz
	SRR13743953_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 14

Similar Datasets

Mutation Mapping of 40 Streptococcus suis strains

Project description:Streptococcus suis is an important zoonotic pathogen that can cause meningitis and sepsis in both pigs and humans. In this study,we evaluated the genetic difference of 40 Streptococcus suis strains belonging to various sequence types by comparative genomic hybridization to identify genes associated with the variation in pathogenicity using NimbleGen’s tilling microarray platform. Application of Comparative Phylogenomics to Identify Genetic Differences Relating to Pathogenicity of Streptococcus suis

2014-05-20 | GSE40035 | GEO

Project description:Phylogenomics of the Neotropical fish family Serrasalmidae with a proposal for suprageneric clades (Teleostei:Characiformes)

| PRJNA603907 | ENA

Phylointeractomics reconstructs functional evolution of protein binding

Project description:Molecular phylogenomics investigates evolutionary relationships based on genomic data. However, despite genomic sequence conservation, changes in protein interactions can occur relatively rapidly and may cause strong functional diversification. To investigate such functional evolution, we here combine phylogenomics with interaction proteomics. We develop this concept by investigating the molecular evolution of the shelterin complex, which protects telomeres, across 16 vertebrate species from zebrafish to humans covering 450 million years of evolution. Our phylointeractomics screen discovers previously unknown telomere-associated proteins and reveals how homologous proteins undergo functional evolution. For instance, we show that TERF1 evolved as a telomere-binding protein in the common stem lineage of marsupial and placental mammals. Phylointeractomics is a versatile and scalable approach to investigate evolutionary changes in protein function and thus can provide experimental evidence for phylogenomic relationships.

2017-02-15 | PXD005517 | Pride

Mutation Mapping of 40 Streptococcus suis strains

Project description:Streptococcus suis is an important zoonotic pathogen that can cause meningitis and sepsis in both pigs and humans. In this study,we evaluated the genetic difference of 40 Streptococcus suis strains belonging to various sequence types by comparative genomic hybridization to identify genes associated with the variation in pathogenicity using NimbleGenM-bM-^@M-^Ys tilling microarray platform. Application of Comparative Phylogenomics to Identify Genetic Differences Relating to Pathogenicity of Streptococcus suis Comparative genomic analysis on the 40 S.suis strains of different serotypes and ST types through tilling arrays

2014-05-20 | E-GEOD-40035 | biostudies-arrayexpress

Single nucleus RNA-sequencing atlas of pediatric solid tumors

Project description:single-nuclei RNA-sequencing on a large cohort of patient tumors and O-PDXs. This research proposal will fill a fundamental gap in our knowledge of the transcriptome heterogeneity across pediatric solid tumor clones and of the normal cells found in the tumor microenvironment.

2026-07-30 | GSE293805 | GEO

Project description:Iguana phylogenomics

| PRJNA1217946 | ENA

Project description:Squamate phylogenomics

| PRJNA650555 | ENA

Project description:H5N1 Phylogenomics

| PRJNA1205001 | ENA

Neanthes nubila

Project description:Nereididae Phylogenomics

| PRJNA1108596 | ENA

Project description:phylogenomics Ormyridae

| PRJNA1068600 | ENA