Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Clinical isolates sequencing

ABSTRACT: Clinical isolates sequencing

PROVIDER: PRJNA754843 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR15674700_subreads.fastq.gz	Fastqsanger.gz
	SRR15674701_subreads.fastq.gz	Fastqsanger.gz
	SRR15674702_subreads.fastq.gz	Fastqsanger.gz
	SRR15674703_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Clinical isolates sequencing

Project description:Clinical isolates sequencing

| PRJNA627194 | ENA

Armenian Clinical isolates

Project description:Armenian Clinical isolates

| PRJEB51925 | ENA

Clinical Klebsiella isolates

Project description:Clinical Klebsiella isolates

| PRJEB59242 | ENA

Mtb clinical isolates

Project description:Mtb clinical isolates

| PRJEB2069 | ENA

Transcriptome analysis of Mycobacterium tuberculosis clinical isolates.

Project description:Bacterial persister cells are phenotypic variants of regular cells that are tolerant to antibiotics. Analysis of clinical isolates of M. tuberculosis showed that strains vary substantially in their tolerance to antibiotics. The level of persisters was very high is some isolates, suggesting that these are hip mutants. We investigated gene expression differences in eight clinical isolates, four of which we characterized as high-persister strains and four as low-persister, or regular, strains. Comparison of gene expression patterns may provide clues as to the genetic mechanisms underlying persister formation.

2015-01-01 | GSE62025 | GEO

Cystobactamid resistant clinical isolates

Project description:Generated cystobactamid resistant clinical isolates of E. coli compared to WT show YgiV upregulation and fimbrial downregulation

2024-10-11 | PXD051732 | Pride

Lactate- and hypoxia-induced beta-glucan masking in responding and non-responding Candida albicans clinical isolates

Project description:RNA sequencing was performed on Candida albicans clinical isolates that display normal (isolates: 3560, 3605, 3609, 4108, 4259) or aberrant (isolates: 3534, 3544, 3621, 3636, 4036) beta-glucan masking in response to lactate and hypoxia. Each clinical isolate was grown to exponential phase in GYNB under normoxic conditions and then exposed for 5 h to: (a) 1% lactate; (b) 0% lactate control; (c) hypoxia; or (d) normoxic control. Three independent experiments were performed for each clinical isolate.

2023-09-05 | E-MTAB-10986 | biostudies-arrayexpress

Proteome of standard WHO L. donovani DD8 strain and Leptomonas clinical isolates from India

Project description:Leishmania donovani WHO reference strain MHOM/IN/80/DD8 and Leptomonas seymouri isolates Ld 2001 and Ld39 were used for proteome analysis which were originally isolated from clinical cases of kala azar patients with different inherent antimonial sensitivities. Ld 2001 was Sb-S and Ld 39 was Sb-R. The genome sequencing of these isolates had confirmed co-infection with Leptomonas.

2016-03-16 | MSV000079588 | MassIVE

Transcription profiling of Candida albicans clinical isolates

Project description:Comparison of 20 clinical isolates of Candida albicans grown under identical growth conditions (biofilm growth conditions in RPMI 1640/10% serum)

2009-02-11 | E-MEXP-1933 | biostudies-arrayexpress

Genome sequencing of six clinical isolates of Candida parapsilosis

Project description:Genome sequencing of six clinical isolates of Candida parapsilosis

| PRJEB73879 | ENA