Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Phylogenomic analyses of sclerophyllous oaks from southwest China

PROVIDER: PRJNA762186 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15841100_1.fastq.gz	Fastqsanger.gz
	SRR15841100_2.fastq.gz	Fastqsanger.gz
	SRR15841101_1.fastq.gz	Fastqsanger.gz
	SRR15841101_2.fastq.gz	Fastqsanger.gz
	SRR15841102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 90

Similar Datasets

Project description:Whole genome resequencing data of three oaks in southwest China

| PRJNA614601 | ENA

LC-MS/MS data of tree foliar samples in Yang Jie lab from Sun Lu - 2023

Project description:A spectrum dataset with 329 tree leaf samples and a blank control file from Yunnan Province, Southwest China. Collection and extraction was completed in Yang Jie Group

| MSV000092950 | MassIVE

wenyan

Project description:Kashin-Beck disease (KBD) is an endemic and chronic osteochondropathy with unknown etiology. The disease mostly occurs in children between the ages of 3 and 13 in a diagonal belt-like area ranging from Northeast to Southwest China. We carried out this microarray analysis to investigate the differences in gene expression levels between KBD patients and healthy controls. Total RNA was isolated from peripheral blood mononuclear cells (PBMCs).

2014-08-30 | E-MTAB-2494 | biostudies-arrayexpress

Project description:Phylogenomic analyses of ciliates

| PRJNA428772 | ENA

Transcriptomic profile (by Real-time quantitative PCR analysis) of oak leaves from the second growth cycle after leaf herbivory over two successive growth cycles

Project description:Priming of plant defenses provides increased plant protection against herbivores and reduces the allocation costs of defense. Defense priming in woody plants remains obscure, in particular due to plant development traits such as the endogenous rhythmic growth displayed by oaks (Quercus robur). By using bioassays with oak microcuttings, and by combining transcriptomic and metabolomic analyses, we investigated how leaf herbivory by Lymantria dispar and root inoculation with the ectomycorrhizal fungus Piloderma croceum prime oak defenses. We further investigated how defense priming is modulated by rhythmic growth of the oaks. A first herbivory challenge in oak leaves primed newly grown leaves for an enhanced induction of jamonic acid (JA)-related direct defenses, or enhanced emission of volatiles, depending on the specific growth stage at which the plants where challenged. Root inoculation with Piloderma abolished the enhanced induction of JA-related defenses and volatile emission. Our results indicate that a first herbivore attack primes direct and indirect defenses of newly formed oak leaves, and that the specific display of defense priming is modulated by rhythmic growth. Our results further show that the priming memory in oaks can be transmitted to the next growth cycle even to the leaves of the new shoot unit.

2022-08-27 | GSE212157 | GEO

GNPS - LC-MS/MS data of tree foliar samples in Yang Jie lab from Sun Lu - 2023

Project description:A spectrum dataset with 329 tree leaf samples and a blank control file from Yunnan Province, Southwest China. Collection and extraction was completed in Yang Jie Group

| MSV000092950 | GNPS

Project description:Sequencing indigenous chickens in southwest China

| PRJNA865247 | ENA

Natrix

Project description:Phylogenomic analyses of the genus Natrix

| PRJNA803021 | ENA

Project description:Genomic and GWAS analyses demonstrate phylogenomic relationships and breeding selection of Gossypium barbadense in China

| PRJNA720818 | ENA

Project description:Assemblies of four indigenous chickens in southwest China

| PRJNA865263 | ENA