Project description:Camellia sinensis var. sinensis, Camellia sinensis var. assamica, Camellia taliensis, Camellia taliensis var. bangwei, Camellia crassicolumna and Camellia tachangensis Targeted Locus (Loci)
| PRJNA222497 | ENA
Project description:WGS and RNA-seq of Camellia sinensis var. assamica cv. Hainan-dayezhong
Project description:Microarray analysis is being performed with cultivated selections using custom designed arrays. Custom designed arrays include the design of microarray probes using clearly described bioinformatics methods. We have used the sequence data related to fungal resistance from Camellia Sp. and Arabidopsis thaliana available in the biological databases, to design these arrays. Results of this work will help us to understand the genes expressed during the blister blight and grey blight infection. Camellia sinensis 4x44k Microarray designed by Genotypic Technology Private Limited. (AMADID:043117)
Project description:We performed shallow whole genome sequencing (WGS) on circulating free (cf)DNA extracted from plasma or cerebrospinal fluid (CSF), and shallow WGS on the tissue DNA extracted from the biopsy in order to evaluate the correlation between the two biomaterials. After library construction and sequencing (Hiseq3000 or Ion Proton), copy number variations were called with WisecondorX.
