Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Juvenile black rockfish

PROVIDER: PRJNA779167 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16931502_1.fastq.gz	Fastqsanger.gz
	SRR16931502_2.fastq.gz	Fastqsanger.gz
	SRR16931503_1.fastq.gz	Fastqsanger.gz
	SRR16931503_2.fastq.gz	Fastqsanger.gz
	SRR16931504_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Single-cell atlas of black rockfish (Sebastes schlegelii) ovarian stroma across reproductive states

Project description:This project contains single-cell RNA sequencing (scRNA-seq) data of the ovarian stroma from the viviparous teleost, black rockfish (Sebastes schlegelii). To define how the ovarian stroma is reprogrammed across reproduction, we profiled stromal cells spanning three distinct biological states: unfertilized, normal-gestation, and abnormal-gestation (characterized by spontaneous embryonic mortality and avascularity). This dataset aims to characterize the stromal cell composition, developmental trajectories, and immune-vascular interactions critical for maintaining intraovarian gestation, providing insights into the evolutionary biology of teleost viviparity.

2026-04-19 | GSE324772 | GEO

Project description:Transcriptome data of juvenile black rockfish liver tissue after exposure to fiber-type MP

| PRJNA1053507 | ENA

Project description:Hepatic transcriptomic analysis in black rockfish

| PRJNA972318 | ENA

Sebastes schlegelii

Project description:Black rockfish liver tissue sequencing data (KAP241848)

| PRJDB39833 | ENA

Project description:RNA-seq of black rockfish (Sebastes schlegelii) testis

| PRJNA891374 | ENA

Project description:RNA-seq of black rockfish (Sebastes schlegelii) ovaries

| PRJNA867515 | ENA

Project description:2b-RAD sequencing of the black rockfish Sebastes schlegelii

| PRJNA1042875 | ENA

Sebastes schlegelii

Project description:Transcriptome Profiles in Macrophages of Black Rockfish (Sebastes schlegelii)

| PRJNA953922 | ENA

Identification of testis-relevant genes using in silico analysis from testes ESTs and cDNA microarray in the black tiger shrimp (Penaeus monodon)

Project description:Comparisons of gene expression profiles between testis and ovary of juvenile and wild brooders were made through a cDNA microarray in the black tiger shrimp (Penaeus monodon). Differentially expressed genes were identified through the microarray analysis, and the microarray results were confirmed by real-time PCR. Selected genes were further characterized.

2011-05-27 | GSE22090 | GEO

Acute effects of high pCO2 and hypoxia on gene expression in blue rockfish (Sebastes mystinus)

Project description:We sequenced complementary DNA created from white muscle messenger RNA in juvenile blue rockfish and performed a differential gene expression analysis to describe the fishes' responses to the global change-related stressors of high pCO2 (low pH) and hypoxia (low dissolved oxygen, DO). To examine gene expression over ecologically realistic timescales that emulate the duration of spring upwelling events in the California Current ecosystem, we collected and sequenced samples after 12 h, 24 h and two weeks of exposure to four treatments: control (pH≈8.0, pCO2≈400μatm, DO≈8 mg/L), high pCO2 (pH≈7.6, pCO2≈1200μatm, DO≈8 mg/L), hypoxic (pH≈8.0, pCO2≈400μatm, DO≈4 mg/L), and combined high pCO2/hypoxic (pH≈7.6, pCO2≈1200μatm, DO≈4 mg/L).

2019-09-30 | GSE129003 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data