Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tailing

ABSTRACT: Primary succession changes composition and functioning of the protist community on mine tailings, especially phototrophic protists

PROVIDER: PRJNA793085 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30593500_1.fastq.gz	Fastqsanger.gz
	SRR30593500_2.fastq.gz	Fastqsanger.gz
	SRR30593501_1.fastq.gz	Fastqsanger.gz
	SRR30593501_2.fastq.gz	Fastqsanger.gz
	SRR30593502_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 202

Similar Datasets

Expression data from budding yeast exposed to simulated asbestos mine drainage

Project description:Investigation of global gene expression changes in Saccharomyces cerevisiae strain NRRL Y-12632 (ATCC® 18824) grown in media made with asbestos mine tailings-laden water compared to the control grown in media made with double distilled water

2017-02-24 | GSE89875 | GEO

Zinc accumulation in Atriplex lentiformis is driven by plant genes and the soil microbiome

Project description:To investigate the effect of different levels of compost treatment on root gene expression of Atriplex lentiformis, we set up a greenhouse experiment with three treatments of 10% (TC10), 15 (TC15), and 20% (TC20) compost amended, metalliferrous mine tailings. Plants were harvested at ~11 weeks and root samples were flash frozen in liquid nitrogen for RNA-seq analysis. We then performed gene expression profiling analysis using data obtained from RNA-seq of 9 root samples from 3 different treatments.

2023-07-21 | GSE208352 | GEO

Project description:Ecological succession of active microbial communities in acidification of mine tailings

| PRJNA379214 | ENA

Project description:mine tailings metagenome

| PRJNA1012134 | ENA

Project description:Microbiome from mine tailings

| PRJNA942043 | ENA

Project description:mine tailings under eCO2

| PRJNA487197 | ENA

Copper mine tailing metagenome

Project description:Copper mine tailing metagenome Metagenome

| PRJNA474760 | ENA

Project description:Tailings sequencing during primary succession

| PRJNA1214178 | ENA

Competition between commensal protists shapes gut mucosal immunity in mice

Project description:Intestinal protists are emerging as key modulators of host immunity and microbial ecology, yet their roles remain poorly defined. Here, we investigated the role of two distinct protists, the amoeba Entamoeba muris, and the parabasalid, Tritrichomonas, to determine how they shape gut immunity in vivo individually and together. Unlike the well-characterized inducer of type 2 immunity, Tritrichomonas, which activates the tuft cell–IL-25–ILC2 circuit in the small intestine, E. muris failed to elicit robust immune responses in the intestine or colon. However, introduction of E. muris into mice naturally colonized by Tritrichomonas spp., or co-infection with E. muris and Tritrichomonas spp. suppressed the Tritrichomonas-induced type-2 response in the small intestine. Fecal and cecal qPCR suggest that E. muris may outcompete Tritrichomonas spp., with reduced protist loads in the cecum and possibly diminished succinate-driven tuft cell activation. We also identified sex-specific differences in the intestinal response to primary Tritrichomonas spp. colonization which have not previously been described. These findings reveal that E. muris can dampen existing type-2 immune circuits without triggering overt inflammation, underscoring its role as an immunomodulatory agent. This work provides a framework for understanding how commensal protists interact within the gut ecosystem and shape mucosal immunity in the absence of pathogenicity.

2026-03-02 | GSE320380 | GEO

Project description:Rare earth mine protist

| PRJNA911511 | ENA