Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium sacchari strain:CNO1

ABSTRACT: Fusarium sacchari strain:CNO1 Genome sequencing

PROVIDER: PRJNA814447 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR18652388_1.fastq.gz	Fastqsanger.gz
	SRR18652388_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Fusarium sacchari strain:FS66

Project description:Fusarium sacchari strain:FS66 Genome sequencing and assembly

| PRJNA667564 | ENA

Fusarium sacchari

Project description:Fusarium sacchari overview

| PRJNA667780 | ENA

Time-course transcriptome profiling of sugarcane hybrid (ZZ1) leaves in response to Fusarium sacchari infection

Project description:Pokkah boeng disease, caused by the fungal pathogen Fusarium sacchari, is a significant threat to sugarcane production worldwide. To elucidate the molecular defense mechanisms of sugarcane against this pathogen, we performed a comprehensive transcriptomic analysis using the hybrid cultivar ZZ1 (Saccharum officinarum x Saccharum spontaneum). Leaf tissues were collected at multiple time points (0, 12, 24, 48, 72, 120, and 144 hours) following inoculation with F. sacchari. Total RNA was extracted and sequenced using the Illumina Novaseq platform. This study aims to identify key differentially expressed genes and regulatory pathways involved in the sugarcane-pathogen interaction, providing valuable genomic resources for breeding disease-resistant sugarcane varieties.

2026-07-01 | GSE320169 | GEO

Fusarium sacchari strain:GXUF-1

Project description:Fusarium sacchari strain:GXUF-1 Genome sequencing and assembly

| PRJNA1029320 | ENA

Fusarium sacchari

Project description:Fusarium sacchari Raw sequence reads

| PRJNA1029664 | ENA

Fusarium sacchari strain:Cf8 | isolate:Cf8

Project description:Fusarium sacchari strain:Cf8 | isolate:Cf8 Genome sequencing

| PRJNA1416649 | ENA

Fusarium sacchari isolate:jinchengjiang1

Project description:Fusarium sacchari isolate:jinchengjiang1 Genome sequencing

| PRJNA523907 | ENA

Fusarium sacchari isolate:HAVH-2025

Project description:Fusarium sacchari isolate:HAVH-2025 Genome sequencing

| PRJNA1332812 | ENA

Fusarium sacchari strain:FF001 | isolate:FF001 | breed:Fusarium

Project description:Fusarium sacchari strain:FF001 | isolate:FF001 | breed:Fusarium Raw sequence reads

| PRJNA1033324 | ENA

Functional exploration of novel glycoside hydrolases in Fervidibacter sacchari PD1T

Project description:Few aerobic hyperthermophiles degrade polysaccharides. We describe the genome-enabled enrichment and isolation of an aerobic hyperthermophile, Fervidibacter sacchari, which was originally ascribed to candidate phylum Fervidibacteria. F. sacchari uses polysaccharides and monosaccharides as sole carbon sources from 65-87.5 °C, and its genome encodes 117 glycoside hydrolases (GHs) spanning 49 GH families, including 31 homologs of understudied GH109, GH177, and GH179 domains. Here, we analyzed the transcriptomes of F. sacchari cells grown on eight different sole carbon and energy sources (beta-glucan, chondroitin sulfate, corn stover, gellan gum, locust bean gum, starch, xanthan gum, and xyloglucan) to link glycoside hydrolase substrate to function, as well as identify potential regulatory mechanisms. These data will provide preliminary characterization of novel carbohydrate-active enzymes at high temperatures.

2023-12-31 | GSE249938 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data