Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Perognathus longimembris

ABSTRACT: Perognathus longimembris overview

PROVIDER: PRJNA818748 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR11431899_1.fastq.gz	Fastqsanger.gz
	SRR11431899_2.fastq.gz	Fastqsanger.gz
	SRR18456006_subreads.fastq.gz	Fastqsanger.gz
	SRR18467760_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 39

Similar Datasets

Perognathus longimembris

Project description:Perognathus longimembris Genomic Resources

| PRJNA777209 | ENA

Perognathus longimembris

Project description:Perognathus longimembris Genome sequencing and assembly

| PRJNA863890 | ENA

Perognathus longimembris

Project description:Perognathus longimembris principal pseudohaplotype genome sequencing

| PRJNA855968 | ENA

Perognathus longimembris

Project description:Perognathus longimembris alternate pseudohaplotype genome sequencing

| PRJNA855967 | ENA

Perognathus longimembris

Project description:Perognathus longimembris Transcriptome or Gene expression

| PRJNA1011379 | ENA

Perognathus longimembris pacificus

Project description:Perognathus longimembris pacificus Genome sequencing and assembly

| PRJNA818714 | ENA

Perognathus longimembris pacificus isolate:BS65

Project description:Perognathus longimembris pacificus isolate:BS65 Genome sequencing and assembly

| PRJNA399459 | ENA

A highly contiguous genome assembly for the pocket mouse Perognathus longimembris longimembris.

Project description:The little pocket mouse, Perognathus longimembris, and its nine congeners are small heteromyid rodents found in arid and seasonally arid regions of Western North America. The genus is characterized by behavioral and physiological adaptations to dry and often harsh environments, including nocturnality, seasonal torpor, food caching, enhanced osmoregulation, and a well-developed sense of hearing. Here we present a genome assembly of Perognathus longimembris longimembris generated from PacBio HiFi long read and Omni-C chromatin-proximity sequencing as part of the California Conservation Genomics Project. The assembly has a length of 2.35 Gb, contig N50 of 11.6 Mb, scaffold N50 of 73.2 Mb, and includes 93.8% of the BUSCO Glires genes. Interspersed repetitive elements constitute 41.2% of the genome. A comparison with the highly endangered Pacific pocket mouse, P. l. pacificus, reveals broad synteny. These new resources will enable studies of local adaptation, genetic diversity, and conservation of threatened taxa.

| S-EPMC10838119 | biostudies-literature

Perognathus inornatus

Project description:Perognathus inornatus overview

| PRJNA777343 | ENA

Perognathus

Project description:Perognathus spp. Genomic Resources

| PRJNA765658 | ENA