Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Camellia vietnamensis

ABSTRACT: Camellia vietnamensis overview

PROVIDER: PRJNA825628 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18771376_1.fastq.gz	Fastqsanger.gz
	SRR18771376_2.fastq.gz	Fastqsanger.gz
	SRR18771377_1.fastq.gz	Fastqsanger.gz
	SRR18771377_2.fastq.gz	Fastqsanger.gz
	SRR18771378_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 73

Similar Datasets

Camellia vietnamensis

Project description:Camellia vietnamensis Raw sequence reads

| PRJNA983986 | ENA

Camellia vietnamensis

Project description:Camellia vietnamensis Raw sequence reads

| PRJNA825399 | ENA

Camellia vietnamensis

Project description:Camellia vietnamensis Raw sequence reads

| PRJNA1029731 | ENA

Panax vietnamensis

Project description:Panax vietnamensis overview

| PRJNA391367 | ENA

Streptomyces vietnamensis

Project description:Streptomyces vietnamensis overview

| PRJNA791726 | ENA

Xenorhabdus vietnamensis

Project description:Xenorhabdus vietnamensis overview

| PRJNA335497 | ENA

Rossellomorea vietnamensis

Project description:Bacillus vietnamensis overview

| PRJNA245056 | ENA

Echinicola vietnamensis

Project description:Echinicola vietnamensis overview

| PRJNA65225 | ENA

Transcriptome analysis of 1-year-old Panax vietnamensis Ha et Grushv.

Project description:Purpose: Panax vietnamensis Ha et Grushv., which contains various valuable ginsenosides, is an important herbal medicine of Vietnam. However, it is an endangered species listed in Vietnam Red Data Book due to over-harvseting. Investigation about genomic or trancriptomic resources is one of the necessary activities to conserve P. vietnamensis Materials and Methods:. In this study, we sequenced the transcriptomes of 1-year-old P. vietnamensis from leaves and roots using Illumina NovaSeqTM6000 system. Results: A total of 60,254,062 and 64,588,528 reads was obtained and then assembled into 45,495 and 49,133 unigenes for leaves and roots, respectively. More than 60% unigenes from two organs were functional annotated using at least one database among Kyoto Encyclopedia of Genes and Genomes, Pfam, Gene Ontology, NCBI non-redundant Protein, and Evolutionary genealogy of genes. Further, the predominant transcripts of each cDNA library were analyzed for different gene expression identification. In addition, 457 unigenes encoding enzymes involved in triterpenoid saponin biosynthesis via the mavelonate (MVA) and the non-MVA (also named as MEP pathways) were discovered.

2021-10-09 | GSE171608 | GEO

Camellia oleifera seed transcriptomics

Project description:We report the expression analysis of seed kernel in Camellia oleifera cultivars. In total 221 cultivars are sequenced by the Illumina sequencing experiments to obtain the gene expression profiles.

2021-12-12 | GSE190644 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data