Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lagochilus ilicifolius

ABSTRACT: Lagochilus ilicifolius overview

PROVIDER: PRJNA898045 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21118698_1.fastq.gz	Fastqsanger.gz
	SRR21118698_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Acanthus ilicifolius

Project description:Acanthus ilicifolius overview

| PRJNA1244511 | ENA

Lagochilus ilicifolius

Project description:Lagochilus ilicifolius Genome sequencing and assembly

| PRJNA870254 | ENA

Acanthus ilicifolius cultivar:wild type

Project description:Acanthus ilicifolius cultivar:wild type Genome sequencing

| PRJNA936276 | ENA

Acanthus ilicifolius isolate:WN-2024

Project description:Acanthus ilicifolius isolate:WN-2024 Genome sequencing

| PRJNA1102049 | ENA

Tyrosinase Inhibitors from the Stems of <i>Streblus Ilicifolius</i>.

Project description:Two new stilbene derivatives, named strebluses C and D, were isolated from the EtOAc-soluble fraction of the stems of Streblus ilicifolius (Moraceae). Its absolute configuration was elucidated based on NMR spectroscopic data interpretation and optical rotation calculation. Streblus C possesses strong tyrosinase inhibitory activity with an IC50 value of 0.01 μM. Docking studies of 1 and 2 with oxy-tyrosinase were carried out to analyze their interactions. The analysis of the docked poses confirmed that 1 showed better binding affinity for oxy-tyrosinase than that of 2.

| S-EPMC8266447 | biostudies-literature

Project description:Endophytic fungi diversity in Acanthus ilicifolius

| PRJNA886607 | ENA

The complete chloroplast genome of <i>Acanthus ilicifolius</i>, an excellent mangrove plant.

Project description:Acanthus ilicifolius is an excellent mangrove plant. In this study, the complete chloroplast genome of A. ilicifolius, a salt tolerant plant of Acanthaceae, was generated. The length of chloroplast genome is 150,758 bp, in which the large-single copy region (LSC) is 82,963 bp, the small-single copy (SSC) region is 17,191 bp, and a pair of inverted repeat (IRa and IRb) regions is 25,302 bp. The chloroplast genome contains 128 genes, including 84 protein-coding genes, eight rRNA genes, and 36 tRNAs genes, with a total GC content of 38%. Phylogenetic analysis showed that A. ilicifolius was closely related to A. ebracteatus, both species belonged to Acanthus genus.

| S-EPMC8023608 | biostudies-literature

Acanthus

Project description:Acanthus ilicifolius RNA-seq Raw sequence reads

| PRJNA654434 | ENA

Physio-anatomical modifications and elemental allocation pattern in Acanthus ilicifolius L. subjected to zinc stress.

Project description:Physio-anatomical modifications and elemental distribution pattern in Acanthus ilicifolius subjected to Zn stress were analysed in this study. Survival of A. ilicifolius plants under a high concentration of ZnSO4 was compensated by the reduction in the photosynthetic efficacy. Micro and macro-elemental distribution pattern in the root tissues was significantly influenced by heavy metal exposure. Tolerance towards the excess toxic metal ions in the tissue of A. ilicifolius was aided by the modified anatomical features. Moreover, the increased deposition of Zn around the central vasculature of the root confirms the complexation of Zn2+ in the xylem vessels. Metal induced molecular level changes of root and leaf samples indicate the presence of OH, NH2, and CH3 deformation as well as C-O-H and C-O-C stretch. A prominent band corresponding to CH3 deformation, pointing hemicellulose fortification, occurs in the cell walls of the xylem, aiding in Zn localization. The phytostabilisation potential of A. ilicifolius is dependent on the coordinated responses which endow with phenotypic plasticity necessary to cope with Zn toxicity.

| S-EPMC9113579 | biostudies-literature

Anti-pathogenicity of Acanthus ilicifolius leaf extracts against A. hydrophila infection in Labeo rohita fingerlings.

Project description:Antibiotic resistance has become one of the inevitable barrier in aquaculture disease management. Herbal drugs has evolved to be the novel ways of combating drug resistant pathogens. In the current investigation, leaf extracts of mangrove plant, Acanthus ilicifolius were assessed for in vitro studies, among the selected four extracts, methanol extract has expressed highest antibacterial activity against P .aeruginosa (4 ± 0.3 mm), A. hydrophila (5.9 ± 0.5 mm), S. aureus (3.5 ± 0.7 mm) and B. subtilis (2.9 ± 0.5 mm) and antioxidant activity, DPPH (81.3 ± 1.0 AAEµg/ml) and FRAP (139.1 ± 1.5 AAEµg/ml).TPC and TFC were higher in the methanolic extract and has exhibited positive correlation with both DPPH and FRAP assays. Considering the in vitro efficiency, methanol extract was purified successively by column and thin layer chromatography and characterisation by GC-MS unveiled the presence of 2-Propanethiol, Trimethylphosphine, Pentanoyl chloride, Dimethylhydroxymethylphosphine and Propanedinitrile, ethylidene. A. hydrophila infected L. rohita fingerlings has survival percentage 81% and 94% in extract treated groups over 0% in negative control and 71% in positive control.

| S-EPMC10440336 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data