Monocytes differentiate into macrophages or dendritic cells along two alternative paths controlled by distinct regulatory networks
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA903917 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR22362220_1.fastq.gz | Fastqsanger.gz | |||
| SRR22362220_2.fastq.gz | Fastqsanger.gz | |||
| SRR22362221_1.fastq.gz | Fastqsanger.gz | |||
| SRR22362221_2.fastq.gz | Fastqsanger.gz | |||
| SRR22362222_1.fastq.gz | Fastqsanger.gz |
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Project description:During inflammation, monocytes differentiate within tissues into macrophages (mo-Mac) or dendritic cells (mo-DC). Whether these two populations derive from alternative differentiation pathways or represent different stages along a continuum remains unclear. Here, we address this question using temporal single-cell RNA sequencing in an in vitro model, allowing the simultaneous differentiation of human mo-Mac and mo-DC. We find divergent differentiation paths, with a fate decision occurring within the first 24 hours and confirm this result in vivo using a mouse model of sterile peritonitis. Using a computational approach, we identify candidate transcription factors potentially involved in monocyte fate commitment. We demonstrate that IRF1 is necessary for mo-Mac differentiation, independently of its role in regulating transcription of interferon-stimulated genes. In addition, we describe the transcription factors ZNF366 and MAFF as regulators of mo-DC development. Our results indicate that mo-Macs and mo-DCs represent two alternative cell fates requiring distinct transcription factors for their differentiation.
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