Project description:The coordination of chloroplast and nuclear genome status are critical for plant cell function, but the mechanism remain largely unclear. In this study, we report that Arabidopsis thaliana CHLOROPLAST AND NUCLEUS DUAL-LOCALIZED PROTEIN 1 (CND1) maintains genome stability in both the chloroplast and the nucleus.
Project description:The coordination of chloroplast and nuclear genome status are critical for plant cell function, but the mechanism remain largely unclear. In this study, we report that Arabidopsis thaliana CHLOROPLAST AND NUCLEUS DUAL-LOCALIZED PROTEIN 1 (CND1) maintains genome stability in both the chloroplast and the nucleus.
Project description:Proplastid-to-chloroplast transitconversion during early plant development involves exintensive genome replication and nucleoid structurale changes of the nucleoid during plant early development. In addition, and the nucleoid distribution shifts from ring-shaped assemblies near the inner- envelope to thylakoids-anchored punctate structures., while the regulatoryThe mechanisms underlying this massive reorganization are still missingnot known. Here we report that the glycerophospholipid phosphatidylethanolamine (PE) governs early chloroplast genome replication and nucleoid biogenesis. Genetic screens revealed that Through genetic screening, we found mutations ofin the phosphatidylserine decarboxylase PSD1 can relieve the transcription-replication conflicts (TRCs) in thea chloroplast R-loop accumulation mutant atrnh1c. PSD1 is thea chloroplast inner- envelope-localized protein that required for PE synthesis. PE reduction leads to decreased replication speed and TRCs stresses, resulting in fewer less R-loops and DNA breaks. We also show that PE physically interacts with replication-related proteins and nucleic acids, promotes DNA replication and nucleoid concentration in the inner- envelope during early seedling development, accomplishing proplastid-to-chloroplast transition. Together, our results reveal a previously unknowndiscovered lipid-involvbased mechanism for genome maintenance and nucleoid- biogenesis, and open up a new horizonsuggest a role for lipids in participating genomeome regulation events.
Project description:Arabidopsis nuclear RecA homologue RA51D were reported to be involved in plant defense responses. Plant organelles such as mitochondria and chloroplast also have their own RecA homologues. We focused on chloroplast RecA homologue RECA1 because it has been well known that the precursors of phytohormones and secondary metabolites related to plant defense responses are synthesized in chloroplast and recent studies have identified several chloroplastic proteins invoved with plant defense responses. We used microarrays to investigate the global gene expression changes by RECA1.
2014-10-15 | GSE55913 | GEO
Project description:plant chloroplast genome
| PRJNA798006 | ENA
Project description:Plant chloroplast genome
| PRJNA743163 | ENA
Project description:Chloroplast genome sequencing of Korean native plants
| PRJNA835661 | ENA
Project description:Complete chloroplast genome of the Korean Asteraceae
Project description:MERS-CoV genome-derived small RNAs in Huh7 cells infected with a Korean isolate of MERS-CoV (KNIH002; Genbank accession no. KT029139.1)