Gymnorhinus cyanocephalus
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PROVIDER: PRJNA959499 | ENA |
REPOSITORIES: ENA
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Project description:Uraeginthus cyanocephalus
| PRJNA969723 | ENA
Project description:BackgroundBirdsong is a popular model system in research areas such as vocal communication, neuroethology or neuroendocrinology of behaviour. As most research has been conducted on species with male-only song production, the hormone-dependency of male song is well established. However, female singing and its mechanisms are poorly understood.Methodology/principal findingsWe characterised the song and its endocrine correlates of blue-capped cordon-bleus (Uraeginthus cyanocephalus), a species in which both sexes sing. Like other estrildids, they produce directed song during courtship and undirected (or solitary) song in isolation, i.e. when the mate is not visible or absent. We compare solitary song of blue-capped cordon-bleus to published descriptions of the song of its relative, the zebra finch (Taeniopygia guttata). Solitary song of cordon-bleus shared some overall song features with that of zebra finches but differed in spectro-temporal song features, sequential stereotypy and sequential organisation. The song of cordon-bleus was dimorphic with respect to the larger size of syllable repertoires, the higher song duration and the lower variability of pitch goodness (measuring the pureness of harmonic sounds) in males. However, in both sexes the overall plasma testosterone concentrations were low (ca. 300 pg/ml) and did not correlate with the sexually dimorphic song motor pattern. Despite such low concentrations, the increase in the rate of solitary song coincided with an increase in the level of testosterone. Furthermore, the latency to start singing after the separation from the mate was related to hormone levels.Conclusions/significanceOur findings suggest that the occurrence of solitary song but not its motor pattern might be under the control of testosterone in female and male cordon-bleus.
| S-EPMC3198478 | biostudies-literature
Project description:In this data set, we compared the expression data of song nuclei HVC, visual cortex entopallium, and the molecular layer of the cerebellum dissected from females and males of 3 songbird species (S. canaria, U. cyanocephalus, P. bicolor) to identify sex-specific stimulated gene expression. Testosterone-treated male and female canaries were also included in order to study whether testosterone effect on transcriptomes is sex-specific. Finally, testosterone-treated female canaries were compared with a rare group of spontaneously singing female canaries to study whether testosterone stimulation would be different from natural stimulation.
2019-03-31 | GSE83674 | GEO
Project description:When foraging, individuals often need to assess potential risk from competitors. Within many food-caching (food-storing) species, individuals can modify their caching behavior depending on whether other individuals are present during the caching event. During caching, individuals may interact with not only conspecifics but also heterospecifics. However, the extent to which individual cachers can discriminate between conspecifics and heterospecifics that present a pilfering threat or not, has received little attention. During this study, we examined this issue with food-storing birds, highly social pinyon jays and less social Clark's nutcrackers. Cachers were given a choice to store their seeds in one of two visually distinct trays. Subsequently, one of the trays was given to an individual (either a conspecific or a heterospecific) who pilfered the caches, whereas the other tray was given to an individual (either a conspecific or a heterospecific) who did not pilfer the caches. When the two trays were returned to the cachers, they recached the seeds from the tray given to the pilfering observer individual more so than the tray given to the non-pilfering observer, but only when the pilferer was a conspecific. Our results suggest that the pinyon jays and nutcrackers could distinguish between conspecifics based on their pilfering behavior, but not between heterospecifics. Together, our results reconsider the ability of corvids to discriminate between individuals based on their pilfering risk and the importance of doing so while caching.
| S-EPMC11870924 | biostudies-literature
Project description:The Pinyon Jay is a highly social, year-round inhabitant of pinyon-juniper and other coniferous woodlands in the western United States. Range-wide, Pinyon Jays have declined ~ 3-4% per year for at least the last half-century. Occurrence patterns and habitat use of Pinyon Jays have not been well characterized across much of the species' range, and obtaining this information is necessary for better understanding the causes of ongoing declines and determining useful conservation strategies. Additionally, it is important to better understand if and how targeted removal of pinyon-juniper woodland, a common and widespread vegetation management practice, affects Pinyon Jays. The goal of this study was to identify the characteristics of areas used by Pinyon Jays for several critical life history components in the Great Basin, which is home to nearly half of the species' global population, and to thereby facilitate the inclusion of Pinyon Jay conservation measures in the design of vegetation management projects. To accomplish this, we studied Pinyon Jays in three widely separated study areas using radio telemetry and direct observation and measured key attributes of their locations and a separate set of randomly-selected control sites using the U. S. Forest Service's Forest Inventory Analysis protocol. Data visualizations, principle components analysis, and logistic regressions of the resulting data indicated that Pinyon Jays used a distinct subset of available pinyon-juniper woodland habitat, and further suggested that Pinyon Jays used different but overlapping habitats for seed caching, foraging, and nesting. Caching was concentrated in low-elevation, relatively flat areas with low tree cover; foraging occurred at slightly higher elevations with generally moderate but variable tree cover; and nesting was concentrated in slightly higher areas with high tree and vegetation cover. All three of these Pinyon Jay behavior types were highly concentrated within the lower-elevation band of pinyon-juniper woodland close to the woodland-shrubland ecotone. Woodland removal projects in the Great Basin are often concentrated in these same areas, so it is potentially important to incorporate conservation measures informed by Pinyon Jay occurrence patterns into existing woodland management paradigms, protocols, and practices.
| S-EPMC7840058 | biostudies-literature
Project description:This study aims to investigate the DNA methylation patterns at transcription factor binding regions and their evolutionary conservation with respect to binding activity divergence. We combined newly generated bisulfite-sequencing experiments in livers of five mammals (human, macaque, mouse, rat and dog) and matched publicly available ChIP-sequencing data for five transcription factors (CEBPA, HNF4a, CTCF, ONECUT1 and FOXA1). To study the chromatin contexts of TF binding subjected to distinct evolutionary pressures, we integrated publicly available active promoter, active enhancer and primed enhancer calls determined by profiling genome wide patterns of H3K27ac, H3K4me3 and H3K4me1.
2022-10-20 | E-MTAB-11946 | biostudies-arrayexpress
Project description:Whole genome sequencing of the Arabidopsis thaliana dot5-1 transposon insertion line described in Petricka et al 2008 The Plant Journal 56(2): 251-263.
2022-08-07 | E-MTAB-12010 | biostudies-arrayexpress