Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Cassiopea symbionts ITS2 sequencing

PROVIDER: PRJNA966908 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24416081_1.fastq.gz	Fastqsanger.gz
	SRR24416081_2.fastq.gz	Fastqsanger.gz
	SRR24416082_1.fastq.gz	Fastqsanger.gz
	SRR24416082_2.fastq.gz	Fastqsanger.gz
	SRR24416083_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 34

Similar Datasets

Quantitative TMT6plex LC-MS/MS of Cassiopea andromeda

Project description:Cassiopea andromeda is an ideal species for examining antioxidant stress response by non-calcifying zooxanthellate cnidarians because unlike its sister species Cassiopea xamachana, which is geographically restricted to Florida and the West Indies, C. andromeda typically occurs in tropical and subtropical waters worldwide. However, the molecular and cellular basis of antioxidant defences in Cassiopea species have largely been ignored but are fundamental to understanding the survival and distribution of these cnidarians, especially given that Cassiopea spp. themselves maybe useful indicators of marine ecosystem health in the face of increasing anthropogenic pollution and global climate change. Here we produced a high-quality draft genome sequence of C. andromeda that improves that will provide a foundational resource for advancing Cassiopea as a model research system for early diverging metazoans.

2026-08-19 | PXD028485 | Pride

Cassiopea xamachana: Cassiosomes

Project description:Cassiosomes are cell clusters that contain symbiotic dinoflagellates and nematocysts and released in a suspension of mucus by the up-side down jellyfish Cassiopea xamachana into the water column. Divers passing Cassiopea colonies experience skin irritation without directly disturbing the jellyfish. Cassiosomes and the structures that release them (vesicular appendages) were examined via shotgun mass spectrometry to determine whether these structures contain toxins that could be responsible for skin irritation.

2020-01-27 | PXD012177 | Pride

Heterologous Microarray Hybridization Between Vesicomyid Symbionts

2008-11-28 | GSE13447 | GEO

Heterologous Microarray Hybridization Between Vesicomyid Symbionts

Project description:The goal of this study was to use heterologous microarray hybridization to determine genomic content shared among different vesicomyid symbionts. These symbionts are closely related and can be thought of as different strains of bacteria, facilitating the use of heterologous microarray hybridization to determine genomic content. Keywords: comparative genomic hybridization Microarrays were built off the Ruthia magnifica genome and two replicate hybridizations to this organism were used as a baseline for comparisons. Genomic DNA from two other vesicomyid symbionts (Calyptogena kilmeri and C. pacifica symbionts) was also hybridized to the array with three biological replicates for each sample.

2010-05-15 | E-GEOD-13447 | biostudies-arrayexpress

Mechanisms of association with amoeba hosts are shared by Paraburkholderia symbionts amid differential responses based on evolutionary history

Project description:In order to understand how Dictyostelium discoideum amoebas and Paraburkholderia symbionts establish symbiosis, we exposed amoebas to strains of symbionts from two clades and sequenced both host and symbiont RNA

2026-08-01 | GSE306028 | GEO

jsCasXama

Project description:Cassiopea xamachana

| PRJEB77019 | ENA

Cassiopea shallow genome sequencing

Project description:Cassiopea WGS

| PRJEB111638 | ENA

Project description:FSD ITS2 sequencing

| PRJNA701788 | ENA

food fermentation metagenome

Project description:ITS2 amplicon sequencing

| PRJDB9083 | ENA