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Metataxonomic analysis of olive cultivars inoculated with an indigenous pathobiome of Pseudomonas

ABSTRACT: Metataxonomic analysis of olive cultivars inoculated with an indigenous pathobiome of Pseudomonas Raw sequence reads

PROVIDER: PRJNA972624 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR24557085_1.fastq.gz	Fastqsanger.gz
	SRR24557085_2.fastq.gz	Fastqsanger.gz
	SRR24557086_1.fastq.gz	Fastqsanger.gz
	SRR24557086_2.fastq.gz	Fastqsanger.gz
	SRR24557087_1.fastq.gz	Fastqsanger.gz

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Knot formation and spread along the shoot stem in 13 olive cultivars inoculated with an indigenous pathobiome of 7 species of Pseudomonas including Pseudomonas savastanoi.

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Knot formation and spread along the shoot stem in 13 olive cultivars inoculated with an indigenous pathobiome of 7 species of Pseudomonas including Pseudomonas savastanoi

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Transcriptome analysis of olive mesocarps during olive fruit maturation

Project description:Olive oil is a primary source of human health-beneficial compounds, establishing olive trees as one of the most vital and valued crop species worldwide. In this study, we performed a transcriptomic analysis across four distinct developmental stages of olive drupes from the emblematic cultivar "Koroneiki".

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Transcriptomic profiile of B16F10 melanoma cell treated with Olive oil and Ozoanted olive oil

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4D Label-Free Quantitative Proteomics Elucidates Differences in Oil Quality Metabolite Accumulation between Olive Cultivars CG-32 and Koroneiki

Project description:A proteomic study of olive fruits based on 4D Label-free technology was conducted to comprehensively analyze the changes in protein expression profiles among different olive cultivars, and to reveal the key protein functions and regulatory mechanisms associated with olive growth, development and fruit oil quality.

2026-02-19 | PXD074837 |

Maturation of olive fruit from five cultivars

Project description:RNA-Seq of fruits from five olive cultivars

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Deciphering the pathobiome

Project description:Deciphering the pathobiome: intra-and inter-kingdom interactions involving the pathogen Erysiphe alphitoides.

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Proteomics of extra virgin olive oil (EVOO)

Project description:Proteins and peptides are minor components of vegetal oils. The presence of these compounds in virgin olive oil was first reported in 2001, but the nature of the olive oil proteome is still a puzzling question for food science researchers. In this project, we have compiled for a first time a comprehensive proteomic dataset of olive fruit and fungal proteins that are present at low but measurable concentrations in a vegetable oil from a crop of great agronomical relevance as olive (Olea europaea L.). Accurate mass nLC-MS data were collected in high definition direct data analysis (HD-DDA) mode using the ion mobility separation step. Protein identification was performed using the Mascot Server v2.2.07 software (Matrix Science) against an ad hoc database made of olive protein entries. Starting from this proteomic record, the impact of these proteins on olive oil stability and quality could be tested. Moreover, the effect of olive oil proteins on human health and their potential use as functional food components could be also evaluated. In addition, this dataset provides a resource for use in further functional comparisons across other vegetable oils, and also expands the proteomic resources to non-model species, thus also allowing further comparative inter-species studies.

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Human in vivo nutrigenomic effect of olive oil

Project description:Olive oil is protective against risk factors for cardiovascular and cancer diseases. A nutrigenomic approach was performed to assess whether olive oil, the main fat of the Mediterranean diet modifies the gene expression in human peripheral blood mononuclear cells. Six healthy male volunteers ingested, at fasting state, 50 ml of olive oil, and continued with the same olive oil as a source of raw fat (25ml/day) during 3 weeks. Prior to intervention a 1-week washout period with sunflower oil as the only source of fat was followed. During the 3 days before, and on the intervention day, a very low phenolic compound diet was followed. At baseline (0h), at post ingestion (6h), and at fasting state after 3 weeks of sustained consumption of olive oil total RNA was isolated from PBMC. Gene expression was evaluated by microarray and verified by qRT-PCR. Keywords: Olive oil, gene expression, single dose, sustained consumption

2008-02-21 | GSE10590 | GEO

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