adipocyte - OmicsDI

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Organisms

Mus musculus (1371)
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Arabidopsis thaliana (10)
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synthetic construct (6)
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Organisms

Mus musculus (872)
Homo sapiens (347)
Rattus norvegicus (16)
Sus scrofa (15)
Bos taurus (13)
Danio rerio (4)
Drosophila melanogaster (3)
Macaca mulatta (3)
Ovis aries (3)
Capra hircus (3)
Bos grunniens (2)
Mus (2)
Musculus (2)
Bombyx mori (2)
unidentified (2)
Rattus rattus (1)
Daucus carota (1)
Cricetulus griseus (1)
Peromyscus maniculatus (1)
Mesocricetus auratus (1)
Coturnix japonica (1)
Oryctolagus cuniculus (1)
Ctenopharyngodon idella (1)
Oncorhynchus mykiss (1)
Equus caballus (1)
Salmo salar (1)
Equus asinus (1)

Repository

ENA (1508)
geo (1228)
biostudies-arrayexpress (966)
pride (156)
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jPOST (30)
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GNPS (4)
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ExpressionAtlas (3)
PanoramaPublic (3)
GPMDB (2)
PAXDB (1)

Tissue

Cell culture (43)
Adipose tissue (22)
Fat cell (16)
Adipocyte (13)
Fibroblast (13)
Preadipocyte (12)
White adipose tissue (11)
Subcutaneous adipose tissue (9)
Brown adipose tissue (6)
White fat cell (5)
Subcutaneous preadipocyte (5)
Liver (5)
Cultured cells (4)
Stromal cell (4)
Macrophage (4)
White adipocyte (3)
Adipose-derived stromal cell (3)
Brown adipocyte (3)
Brown fat cell (3)
Blood plasma (3)
Stem cell (3)
Spleen (3)
Epithelial cell (3)
Subcutaneous fat cell (2)
Adipocyte of omentum tissue (2)
Fat cell differentiation (2)
Adipocyte cell line (2)
Adipose tissue development (2)
Helper T-lymphocyte (2)
Others (1)

Disease

Type 2 diabetes mellitus (17)
Obesity (12)
Simpson-Golabi-Behmel syndrome type 1 (7)
Normal (6)
Multiple myeloma (4)
Breast cancer (3)
Disease free (3)
Not Available (2)
Cancer (2)
COVID-19 (2)
Acute leukemia (2)
Idiopathic myelofibrosis (1)
Model of metabolic syndrome (1)
HIV (1)
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Apparently healthy (1)
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Familial combined hyperlipidemia (1)
Leukemia (1)
Hypopituitary (1)
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Unknown (1)
None (1)
Carcinoma (1)
Obesity (1)
Lipodystrophy (1)
Abdominal aortic aneurysm (1)
Disease of metabolism (1)
Diabetes mellitus (1)
Heart disease (1)

Technology Type

Mass Spectrometry (160)
Shotgun proteomics (86)
Mass spectrometry (40)
Bottom-up proteomics (36)
Mass spectrometry assay (25)
Data-dependent acquisition (17)
Data-independent acquisition (13)
Affinity purification coupled with mass spectrometry proteomics (9)
SWATH MS (7)
ESI (4)
Gel-based experiment (4)
HDMSE (3)
Top-down proteomics (3)
NMR spectroscopy (2)
Mass spectrometry imaging (2)
SRM/MRM (2)
ILLUMINA, NextSeq 500 (1)
Perlegen, Affymetrix, Illumina (1)
Illumina HiSeq 2000 (1)
Illumina Genome Analyzer II (1)
MSE (1)

Instrument Platform

Illumina NovaSeq 6000 (28)
NextSeq 500 (24)
Illumina HiSeq 4000 (21)
Illumina HiSeq 2500 (19)
Illumina HiSeq 2000 (11)
Agilent High resolution C scanner (4)
NextSeq 550 (3)
Illumina HiSeq 3000 (3)
Microcentrifuge (2)
The Agilent scanner G2565BA (2)
Agilent�s Microarray Hybridization Oven (2)
NanoDrop ND-1000 Spectrophotometer (NanoDrop Technologies) (2)
NA (2)
Illumina (2)
NextSeq 2000 (2)
Illumina MiSeq (2)
GeneTitan MultiChannel System (1)
GeneChip Clariom S mouse array cartridge and Affymetrix GeneTitan MultiChannel System (1)
GeneChip Pico Kit (Affymetrix/ThermoFisher) (1)
ReliaPrep RNA Miniprep System (Promega) (1)
Adipocyte Progenitor Isolation Kit (Miltenyi Biotec) (1)
Standard laboratory equipment for RNA library construction (1)
Agilent Bioanalyser for RNA quality control (1)
Laboratory greezer (-80C storage) and dry ice for snap-freezing (1)
I.DOT (Dispendix), C.WASH (CYTENA), Qubit Fluorometer (Thermo Fisher Scientific), Agilent TapeStation 4200 (1)
BD FACSDiscover S8 (1)
10X Genomics Chromium Single Cell Kit (1)
BD Aria, 10X Chromium (1)
Affymetrix GeneTitan system (1)
Affymetrix GeneChip HT MG-430 PM (1)

Publication Date

2025 (227)
2026 (209)
2024 (197)
2013 (174)
2022 (166)
2023 (160)
2014 (144)
2021 (139)
2015 (137)
2010 (122)
2012 (118)
2020 (102)
2019 (102)
2016 (95)
2011 (91)
2018 (84)
2008 (75)
2009 (59)
2007 (53)
2017 (47)
2005 (15)
2006 (6)
2004 (3)
2003 (1)
2002 (1)

UNIPROT ID/AC

HV315_HUMAN (1)
ARMD4_HUMAN (1)
A0A087WXI2_HUMAN (1)
UBB_HUMAN (1)
H4_HUMAN (1)
H2A2A_HUMAN (1)
APOC4_HUMAN (1)
LC7L2_HUMAN (1)
ATS13_HUMAN (1)
PCH2_HUMAN (1)
PCSK9_HUMAN (1)
FA7_HUMAN (1)
PRAP1_HUMAN (1)
H31_HUMAN (1)
H32_HUMAN (1)
CP046_HUMAN (1)
ERD22_HUMAN (1)
ADT3_HUMAN (1)
RBM8A_HUMAN (1)
SPA11_HUMAN (1)
HSP76_HUMAN (1)
APOA5_HUMAN (1)
RNAS4_HUMAN (1)
TBA1B_HUMAN (1)
A0A096LPE2_HUMAN (1)
EPIPL_HUMAN (1)
GP1BB_HUMAN (1)
EF1G_HUMAN (1)
BIN2_HUMAN (1)
FAAA_HUMAN (1)

ENSEMBL ID

ENSG00000167720 (1)
ENSG00000167701 (1)
ENSG00000167699 (1)
ENSG00000204394 (1)
ENSG00000167676 (1)
ENSG00000187676 (1)
ENSG00000204386 (1)
ENSG00000204385 (1)
ENSG00000187581 (1)
ENSG00000167658 (1)
ENSG00000187210 (1)
ENSG00000204370 (1)
ENSG00000204310 (1)
ENSG00000187134 (1)
ENSG00000167588 (1)
ENSG00000187091 (1)
ENSG00000204228 (1)
ENSG00000204084 (1)
ENSG00000187048 (1)
ENSG00000167580 (1)
ENSG00000186951 (1)
ENSG00000204007 (1)
ENSG00000203859 (1)
ENSG00000186908 (1)
ENSG00000167508 (1)
ENSG00000186666 (1)
ENSG00000203857 (1)
ENSG00000203837 (1)
ENSG00000186642 (1)
ENSG00000167468 (1)

CHEBI ID

CHEBI:15452 (1)
CHEBI:52386 (1)
CHEBI:15436 (1)
CHEBI:27484 (1)
CHEBI:28728 (1)
CHEBI:15627 (1)
CHEBI:16144 (1)
CHEBI:9100 (1)
CHEBI:17513 (1)
CHEBI:16906 (1)
CHEBI:28922 (1)
CHEBI:34939 (1)
CHEBI:27696 (1)
CHEBI:27555 (1)
CHEBI:17507 (1)
CHEBI:15546 (1)
CHEBI:18116 (1)
CHEBI:28099 (1)
CHEBI:27624 (1)
CHEBI:51340 (1)
CHEBI:30851 (1)
CHEBI:28747 (1)
CHEBI:25941 (1)
CHEBI:28770 (1)
CHEBI:17908 (1)
CHEBI:48294 (1)
CHEBI:17119 (1)
CHEBI:43451 (1)
CHEBI:5764 (1)
CHEBI:17606 (1)

Metabolite Name

Taurine (13)
Creatine (12)
Uracil (11)
Myristic acid (11)
Xanthine (11)
Pyroglutamic acid (10)
Propionic acid (10)
Glyceric acid (10)
Oxypurinol (10)
Malic acid (10)
Adenosine (10)
Phenylalanine (10)
Uridine (10)
Inosine (10)
Ketoleucine (9)
Pentadecanoic acid (9)
Glycine (9)
Citrulline (9)
Ornithine (9)
Pantothenic acid (9)
Pipecolic acid (9)
Phe-Val (9)
Linoleic acid (9)
Dodecanoic acid (9)
Azelaic acid (9)
Hypoxanthine (9)
Histidine (8)
Leucine (8)
Pro-Ile (8)
Dimethylglycine (8)

First Public Date

2025 (207)
2026 (194)
2024 (176)
2014 (156)
2023 (146)
2022 (136)
2021 (115)
2020 (98)
2019 (95)
2018 (55)
2017 (42)
2015 (34)
2016 (33)
2013 (21)

Modelling Approach

Ordinary differential equation model (5)

Lab affiliation

Helmholtz-Centre for Environmental Research UFZ GmbH (6)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center Germany (5)
Helmholtz-Centre for Environmental Research – UFZ, Department of Molecular Toxicology (3)
FBI (2)
The Charles Perkins Centre, University of Sydney, Australia (2)
Dana-Farber Cancer Institute and Harvard Medical School (2)
The Charles Perkins Centre School of Life and Environmental Sciences The University of Sydney Australia (2)
Weill Cornell Medicine-Qatar (2)
Department Molecular Toxicology, Helmholtz Centre for Environmental Research GmBH - UFZ (2)
Helmholtz-Centre for Environmental Research - UFZ, Department of Molecular Toxicology (2)
Thirty Head Street, Yaohai District, Hefei City, Anhui Province, Anhui Medical University East Campus (2)
CIB-CSIC (Spanish Research Council) (2)
The University of Sydney (2)
Department of Molecular & Integrative Physiology,University of Michigan Medical School, 5325 Brehm Tower, 1000 Wall St., Ann Arbor, MI, 48105 (2)
Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, University of Sydney, Camperdown, NSW, Australia (2)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (2)
1Center for Medical Genetics, Ghent University Hospital, Ghent, 9000, Belgium 2Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent (1)
Central European Institute of Technology, Masaryk University, Brno, Czech Republic (1)
Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas, Campinas, SP, Brazil (1)
1 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Toulouse, France. Equipe labellisée par la Ligue contre le cancer 2 Infrastructure Nationale de Protéomique, ProFI, FR 2048, Toulouse, France. (1)
UT Southwestern (1)
Helmholtz Diabetes Center Munich (1)
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3C584 CG Utrecht, The Netherlands (1)
Institute of Molecular and Cell Biology, ASTAR (1)
Institute of Metabolic Science, University of Cambridge, UK (1)
Research Centre for Toxic Compounds in the Environment, Environmental Physiology, Faculty of Science, Masaryk University, Brno, Czech Republic (1)
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands. (1)
Dana-Farber Cancer Institute/ Harvard Medical School (1)
State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences & School of Basic Medicine Peking Union Medical College, Beijing 100005, China (1)
Dept. of Human Biology, FHML, Maastricht University, P.O. Box 616, 6200 MD, Maastricht, The Netherlands (1)

IsPrivate

False (8)

Model Flag

Non Kinetic (3)

Modification

15.994915 (1)
N6 (1)
N6-dimethyl-L-lysine (1)
57.021464 (1)

Study type

Transcription profiling by array (649)
RNA-seq of coding RNA (109)
ChIP-seq (60)
RNA-seq of coding RNA from single cells (13)
RNA-seq of non coding RNA (13)
Transcription profiling by RT-PCR (12)
Methylation profiling by array (12)
Unknown experiment type (10)
Comparative genomic hybridization by array (10)
ChIP-chip by tiling array (7)
Animal - High-throughput sequencing (6)
Methylation profiling by high throughput sequencing (6)
RNA-seq of total RNA (6)
ATAC-seq (5)
MicroRNA profiling by array (5)
Animal - One-color microarray (4)
Other (4)
Transcription profiling by SAGE (3)
Animal - Single-cell sequencing (3)
RNAi profiling by array (3)
ChIP-chip by array (3)
MicroRNA profiling by high throughput sequencing (3)
Single nucleus RNA sequencing (3)
Human - High-throughput sequencing (2)
High-throughput sequencing (2)
Cell line - High-throughput sequencing (2)
Spatial transcriptomics by high-throughput sequencing (2)
DNA-seq (2)
Cell line - One-color microarray (1)
Human - One-color microarray (1)

Release Date

2022 (612)
2021 (579)
2025 (491)
2023 (482)
2020 (445)
2019 (427)
2024 (426)
2018 (376)
2016 (359)
2017 (356)
2015 (319)
2014 (308)
2013 (278)
2012 (211)
2010 (201)
2011 (189)
2009 (126)
2008 (125)
2026 (104)
2007 (75)
2006 (26)
2004 (18)
2005 (17)
2003 (12)
2002 (6)
1999 (4)
1998 (4)
2001 (2)
1997 (2)
2000 (1)

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Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling_untargeted metabolites_Lipidomics

Upon penetrating the basement membrane, breast cancer cells directly interact with their surrounding adipose tissue, which forms a unique tumor-associated adipose microenvironment (TAME). However, the underlying mechanism involved in the regulation of lipid metabolic remodeling in the TAME remain...

2025-04-30 | MTBLS12289 | MetaboLights

Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling

2025-04-30 | MTBLS12405 | MetaboLights

Alcohol dehydrogenase 1B is crucial for adipocyte homeostasis

Not available

ORGANISM(S): Homo sapiens

ST002400 | MetabolomicsWorkbench

Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling_Medium and long chain fatty acids

2025-04-30 | MTBLS12290 | MetaboLights

Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling_Medium and long chain fatty acids_four group

2025-04-30 | MTBLS12291 | MetaboLights

Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling_Lipidomics_amino

2025-04-30 | MTBLS12287 | MetaboLights

Adipocyte-specific Zeb1 confers breast cancer progression by triggering the tumor-associated adipose microenvironment remodeling

2025-04-30 | MTBLS12286 | MetaboLights

Mouse adipocyte phosphoproteome during differentiation

Kosaku Shinoda, Kana Ohyama, Yutaka Hasegawa, Hsin-Yi Chang, David W. Scheel, Louis Z. Sharp, Haemin Hong, Takashi Hosono, Mayu Ogura, Ayaka Sato, Yasushi Ishihama, and Shingo Kajimura. Phosphoproteomics Identifies CK2 As a Negative Regulator of Beige Adipocyte Thermogenesis and Energy Expenditure. ...

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2015-08-28 | MSV000079278 | MassIVE

Adipocyte-derived β-hydroxybutyrate confers metabolic resilience in multiple myeloma by stabilizing IRF4 via NAT10-mediated acetylation

Multiple myeloma (MM) remains an incurable hematologic malignancy despite advances in treatment. While obesity is a well-established risk factor, the underlying metabolic mechanisms by which adipocytes contribute to disease progression remain elusive. Here, we uncover a critical m...

2026-05-07 | MTBLS14445 | MetaboLights

Metabolomics of B-cell Acute Lymphoblastic Leukemia in Response to Adipocyte Conditioned Media

Not available

ORGANISM(S): Homo sapiens

ST002383 | MetabolomicsWorkbench

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