bbb - OmicsDI

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Unknown (4813)
Genomics (379)
Transcriptomics (375)
Proteomics (94)
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Models (3)
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Organisms

Mus musculus (205)
Homo sapiens (162)
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Human immunodeficiency virus 1 (57)
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cellular organisms (2)
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unidentified (1)
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Organisms

Mus musculus (159)
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Normal (1)
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Technology Type

Mass Spectrometry (59)
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Mass spectrometry (9)
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HDMSE (1)

Instrument Platform

Illumina NovaSeq 6000 (9)
NextSeq 500 (7)
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- (1)
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Publication Date

2025 (87)
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2015 (21)
2020 (20)
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2016 (17)
2014 (14)
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2017 (10)
2012 (10)
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2011 (4)
2008 (4)
2007 (2)
2005 (2)
2004 (1)

UNIPROT ID/AC

P05067 (1)

CHEBI ID

CHEBI:28230 (2)
CHEBI:77065 (2)
CHEBI:73688 (2)
CHEBI:17351 (2)
CHEBI:27248 (2)
CHEBI:28621 (2)
CHEBI:34900 (2)
CHEBI:74475 (2)
CHEBI:116314 (2)
CHEBI:15354 (2)
CHEBI:16335 (2)
CHEBI:16708 (2)
CHEBI:15858 (1)
CHEBI:47794 (1)
CHEBI:139484 (1)
CHEBI:62825 (1)
CHEBI:29089 (1)
CHEBI:38307 (1)
CHEBI:137150 (1)
CHEBI:29501 (1)
CHEBI:139482 (1)
CHEBI:30633 (1)
CHEBI:85038 (1)
CHEBI:138491 (1)
CHEBI:18961 (1)
CHEBI:80024 (1)
CHEBI:176845 (1)
CHEBI:178048 (1)
CHEBI:178047 (1)
CHEBI:178046 (1)

Metabolite Name

3-Hydroxydodecanedioic acid (3)
Traumatic acid (3)
Dodecanedioic acid (3)
L-Serine (3)
MG(0:0/16:1(9Z)/0:0) (2)
LysoPI(16:0/0:0) (2)
LysoPG(18:1(9Z)/0:0) (2)
N-(2'-(4-benzenesulfonamide)-ethyl) arachidonoyl amine (2)
Trihydroxycoprostanoic acid (2)
N-(3beta,7beta,dihydroxycholest-5-en-24-oyl) glycine (2)
Isolithocholic acid (2)
4-Androsten-3beta,17beta-diol 17-sulfate (2)
9S,11R,15S-trihydroxy-2,3-dinor-13E-prostaenoic acid-cyclo[8S,12R] (2)
2-Ethoxy-6(5-tetrazolyl)xanthone (2)
3-[4-(sulfooxy)phenyl]propanoic acid (2)
Tridecanedioic acid (2)
Mycinonic acid III (2)
2,4-Dihydroxyacetophenone 5-sulfate (2)
5-Sulfosalicylic acid (2)
D-Glycero-d-galacto-heptose (2)
Cis-Acetylacrylate (2)
LysoPE(20:4(5Z,8Z,11Z,14Z)/0:0) (2)
Palmitoylglycine (2)
N-Butyrylglycine (2)
D-Xylose (2)
LysoPE(18:3(9Z,12Z,15Z)/0:0) (2)
Sulfolithocholylglycine (2)
Phenylalanylleucine (2)
3-methyl-tetradecanedioic acid (2)
4-methyl-5-carboxyethyl-2-furanpentanoic acid (2)

First Public Date

2025 (73)
2026 (66)
2024 (63)
2023 (28)
2022 (26)
2021 (26)
2020 (20)
2014 (20)
2019 (10)
2018 (8)
2016 (7)
2017 (6)
2015 (4)
2013 (2)

Modelling Approach

Machine learning (1)
Ordinary differential equation model (1)

Lab affiliation

DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (3)
Translational Biomarker Group, University of Geneva, Geneva, Switzerland (2)
Sunitha Nagrath Lab, 2800 Plymouth Rd, NCRC Building 10, Ann Arbor, MI- 48109 (1)
Cancer Signalling Research Group, School of Biomedical Science and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA. (1)
INSERM U1242, Université de Rennes, Centre de Lutte contre le Cancer Eugène Marquis, Rennes, France. (1)
Proteomics Platform CIDC bioGUNE Bizkaia Tech. Park Build. 800 48160 Derio 48160 Spain (1)
Department for Biochemistry and Molecular Biology University of Southern Denmark Odense, Denmark (1)
Shenzhen Institute of Advanced Technology,Chinese Academy of Sciences (1)
Zilkha Neurogenetic Insitute Deprtment of Psychiatry and Behavioral Sciences Department of Physiology and Neuroscience Keck School of Medicine University of Southern California (1)
Gladstone Institute of Neurological Disease, San Francisco, CA, USA; Department of Neurology, University of California, San Francisco, San Francisco, CA, USA; Bakar Aging Research Institute, University of California, San Francisco, San Francisco, CA, USA. (1)
Proteomics Team, Nestlé Institute of Health Sciences, Lausanne, Switzerland (1)
UK Dementia Research Institute University of Edinburgh (1)
Assistant Professor, Neurology University of California, San Francisco (1)
Tianjin Univerisity of Traditional Chinese Medicine (1)
Denali Therapeutics (1)
Department of Neurology, Mental and Neurological Disease Research Center, the Third Affiliated Hospital of Sun Yat-sen University (1)
Université de Paris, Inserm, UMRS-1144 Optimisation Thérapeutique en Neuropsychopharmacologie (1)
Neurovascular Research Laboratory, Vall Hebron Institute of Research, Barcelona, Spain. (1)
Laboratory of Neurovascular Signaling, Department of Molecular Biology, ULB Neuroscience Institute, Université libre de Bruxelles (ULB), Gosselies B-6041, Belgium (1)
TEDA Institute of Biological Sciences and Biotechnology, Nankai University, China (1)
IRCCS G. Gaslini (1)
NeoVasc; Microvascularendothelium and neonatal acquired cerebral lesions Laboratory INSERM-ER28 Faculty of Medicine and Pharmacy University of Rouen, 22 Boulevard Gambetta 76183, Rouen cedex France (1)
1) AGH University of Krakow, Krakow, Poland 2) Maj Institute of Pharmacology, Polish Academy od Sciences, Krakow, Poland (1)
Physiopathology laboratory of the Blood Brain Barrier (1)
Department of Biological Engineering, MIT (1)
Departamento de Neuropatología Molecular. Instituto de Fisiología Celular. Universidad Nacional Autónoma de México (UNAM) (1)
University of South Florida, Morsani College of Medicine, Department of Molecular Pharmacology and Physiology (1)
Director of CJCADR & Director of CJCADR - GL Queensland Brain Institute Australia (1)
Aalborg University Fredrik Bajersvej 3B 9220 Aalborg (1)
Max Planck Institute of Biochemistry, Martinsried, Munich, Germany; NNF Center for Protein Research, Copenhagen, Denmark (1)

IsPrivate

False (2)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)

Classification

bacteria (3)
fungi (2)

Modification

15.994915 (1)

Study type

Transcription profiling by array (65)
RNA-seq of coding RNA (16)
RNA-seq of non coding RNA (4)
Cell line - High-throughput sequencing (3)
Comparative genomic hybridization by array (3)
RNA-seq of coding RNA from single cells (3)
ChIP-chip by array (2)
Transcription profiling by SAGE (1)
Animal - One-color microarray (1)
Animal - Single-cell sequencing (1)
Cell line - One-color microarray (1)
Animal - High-throughput sequencing (1)
ChIP-seq (1)
RNA-seq of total RNA (1)

Release Date

2022 (670)
2025 (638)
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2020 (420)
2019 (306)
2018 (261)
2017 (219)
2016 (154)
2015 (131)
2014 (122)
2026 (76)
2013 (73)
2012 (61)
2011 (47)
2010 (40)
2009 (25)
2008 (16)
2007 (7)
2006 (5)
2005 (3)
2004 (3)
2000 (1)
1999 (1)

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K ATP protein knowledge page

Exposure with the id: bbb

bbb | Physiome Model Repository

Rattus norvegicus strain:WKY/Bbb RGD_1581635

Rattus norvegicus strain WKY/Bbb RGD_1581635 Genome sequencing and assembly

PRJNA825508 | ENA

Rattus norvegicus strain:WKY/Bbb

0.01X assembly of rat strain WKY/Bbb by the European STAR Consortium

PRJNA18687 | ENA

Rattus norvegicus strain:SHRSP/Bbb

0.01X assembly of rat strain SHRSP/Bbb by the European STAR Consortium

PRJNA18689 | ENA

Qosa2014 - Mechanistic modeling that describes amyloid-Beta clearance across BBB

Qosa2014 - Mechanistic modeling that describes Aβ clearance across BBB Qosa2014 - Mechanistic modeling that describes Aβ clearance across BBB. Encoded non-curated model. Issues: - Confusing equation 6 - Missing initial values for spices This model is described in the article: Dif...

2015-04-15 | MODEL1409240002 | BioModels

Transcriptome analysis after BBB-EC migration

PRJNA1073892 | ENA

Gene expression data of BBB and BCB two-cell embryos

We constructed one-cell stage embryos by maternal pronuclear (mPN) transfer having B6 ooplasm, B6 paternal PN (pPN), and either B6 or C3H mPN (BBB and BCB, respectively). We collected embryos of each type that were either treated (BBB+a, BCB+a) or untreated with Î±-amanitin (BBB, BCB) at the two-cel...

ORGANISM(S): Mus musculus

2010-03-22 | E-GEOD-17886 | biostudies-arrayexpress

Burkholderia gladioli strain:BBB-01

Burkholderia gladioli strain:BBB-01 Genome sequencing

PRJNA691633 | ENA

Microarray data from control and pericyte-deficient mouse brain microvascular transcriptomes

The blood-brain barrier (BBB) consists of specific physical barriers, enzymes and transporters, which together maintain the necessary extracellular environment of the central nervous system (CNS). The main physical barrier is found in the CNS endothelial cell, and depends on continuous complexes of ...

ORGANISM(S): Mus musculus

2010-10-21 | E-GEOD-15892 | biostudies-arrayexpress

Brain endothelial GSDMD activation mediates inflammatory BBB breakdown

PRJNA868813 | ENA

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