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MetabolomicsNew plasma preparation approach to enrich metabolome coverage in untargeted metabolomics: plasma protein bound hydrophobic metabolite release with proteinase K
Plasma untargeted metabolomics is a common method for evaluation of the mechanisms underlying human pathologies and identification of novel biomarkers. The plasma proteins provide the environment for transport of hydrophobic metabolites. The current sample preparation protocol relies on the immediat...
2022-03-18 | MTBLS670 | MetaboLights
GenomicsMapping meiotic crossovers in Arabidopsis using low-coverage whole-genome sequencing
Whole-genome DNA libraries were prepared from a population of just under 100 Col/Ler F1 backcrossed to Col. Low-coverage whole-genome sequencing was used to map meiotic crossovers in this population following the protocol described in Rowan et al., 2015, doi: 10.1534/g3.114.016501.
ORGANISM(S): Arabidopsis thaliana 
2015-10-15 | E-MTAB-3926 | biostudies-arrayexpress
GenomicsCoverage-Immuno
Coverage-Immuno
PRJEB88827 | ENA
TranscriptomicsCoverage-Immuno
COVERAGE-Immuno is a project that aims to perform in-depth, repeated evaluation of immunological markers and RNA data in COVID-19 patients who are being treated at home, to learn more about the disease. The project is embedded in an existing randomised clinical trial, called COVERAGE, that is evalua...
ORGANISM(S): Homo sapiens 
2026-09-01 | E-MTAB-15066 | biostudies-arrayexpress
GenomicsMosquitoes low coverage genome sequencing
Mosquitoes low coverage genome sequencing
PRJEB22896 | ENA
ProteomicsSequence Coverage Visualizer: A web application for protein sequence coverage 3D visualization
Protein structure is connected with its function and interaction and plays an extremely important role in protein characterization. As one of the most important analytical methods for protein characterization, Proteomics is widely used to determine protein composition, quantitation, interaction, and...
ORGANISM(S): Homo sapiens (Human) 
2022-12-14 | PXD032786 | Pride
Proteomics Protein sequence coverage 3d structure Visualization 
TranscriptomicsOryza sativa ssp. indica Illumina lwhole-genome bisulfite sequencing used for coverage comparison next to the method plant-RRBS
The contained data consist of Illumina HiSeq reads generated genomic DNA of Oryza sativa ssp. indica used for comparative coverage aspects with plant-RRBS methylome profiling by bioinformatics analyses. The inbred control line and a derived epiline LR2 of the 4th selfing were analysed using whole-ge...
ORGANISM(S): Oryza sativa Indica Group 
2017-12-14 | E-MTAB-5002 | biostudies-arrayexpress
GenomicsArabidopsis radA mutant cpDNA coverage
Study coverage of the Arabidopsis thaliana radA mutant on cpDNA
PRJEB40831 | ENA
ModelsMukhta2018-the effect of bednet coverage on malaria transmission in South Sudan
A campaign for malaria control, using Long Lasting Insecticide Nets (LLINs) was launched in South Sudan in 2009. The success of such a campaign often depends upon adequate available resources and reliable surveillance data which help officials understand existing infections. An optimal allocation of...
2020-03-20 | MODEL2003160003 | BioModels
UnknownImproving coverage measurement for reproductive, maternal, neonatal and child health: gaps and opportunities.
Not available
S-EPMC5460400 | biostudies-literature
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