gene ontology (go)

Show results for

Unknown (10526)
Genomics (1640)
Proteomics (1369)
Transcriptomics (1228)
Methylation profiling (30)
Other (17)
Clinical (2)
Models (1)
Genomic (1)
Metabolomics (1)

Organisms

Homo sapiens (978)
Mus musculus (566)
Rattus norvegicus (170)
Bos taurus (62)
Arabidopsis thaliana (43)
Danio rerio (39)
Sus scrofa (36)
Gallus gallus (32)
Oryza sativa (31)
Saccharomyces cerevisiae (28)
Taeniopygia guttata (27)
Ovis aries (25)
Triticum aestivum (25)
Drosophila melanogaster (22)
Caenorhabditis elegans (17)
Candida albicans (16)
Oncorhynchus mykiss (11)
Glycine max (10)
Salmo salar (8)
Macaca mulatta (7)
Brassica napus (3)
Apis mellifera (3)
Boehmeria nivea (2)
Sturnus vulgaris (2)
Manihot esculenta (2)
Oryza sativa Indica Group (2)
Clostridioides difficile 630 (2)
Solanum chilense (1)
Gastrodia elata (1)
Eucalyptus nitens (1)

Organisms

Homo sapiens (436)
Mus musculus (281)
Rattus norvegicus (91)
Danio rerio (27)
Bos taurus (25)
Sus scrofa (24)
Gallus gallus (18)
Oryza sativa (13)
Ovis aries (10)
Arabidopsis thaliana (10)
Taeniopygia guttata (9)
Oncorhynchus mykiss (9)
Drosophila melanogaster (9)
Caenorhabditis elegans (9)
Gossypium hirsutum (7)
Vitis vinifera (5)
Saccharomyces cerevisiae (5)
Canis lupus familiaris (5)
Pyricularia oryzae (5)
Staphylococcus aureus (5)
Salmo salar (4)
Solanum tuberosum (4)
Candida albicans (4)
Brassica rapa subsp. pekinensis (4)
Oryctolagus cuniculus (4)
Zea mays (4)
Triticum aestivum (4)
Brassica napus (3)
Bombyx mori (3)
Plasmodium falciparum (3)

Repository

ENA (1512)
pride (1239)
geo (985)
biostudies-arrayexpress (410)
iProX (111)
MassIVE (11)
GPMDB (5)
jPOST (4)
PAXDB (3)
NODE (2)
BioModels (1)
dbGaP (1)
EGA (1)
MetaboLights (1)
PanoramaPublic (1)

Tissue

Cell culture (246)
Brain (91)
Epithelial cell (61)
Leaf (55)
Whole body (45)
Liver (42)
Plant cell (41)
Blood plasma (39)
Heart (33)
Root (30)
Blood serum (26)
Blood (24)
Lung (24)
Macrophage (21)
Permanent cell line cell (21)
Skin (21)
Blood cell (20)
Fibroblast (20)
Colon (18)
Stem cell (18)
Hepatocyte (16)
Kidney (16)
Testis (14)
Bone marrow (13)
Cell suspension culture (13)
Primary cell (11)
T cell (11)
Cerebrospinal fluid (10)
Saliva (10)
Pancreas (2)

Disease

Disease free (38)
Breast cancer (27)
Colon cancer (11)
Wounds and Injuries (11)
Cardiovascular system disease (10)
Type 2 diabetes mellitus (10)
Cervix carcinoma (6)
Parkinson's disease (6)
Not Available (5)
Alzheimer's disease (5)
Non-small cell lung carcinoma (5)
Amyotrophic lateral sclerosis (4)
Acute leukemia (4)
Age related macular degeneration (4)
Brain ischemia (4)
Cerebrovascular disease (4)
Colitis (4)
Gastric adenocarcinoma (4)
Lung adenocarcinoma (4)
Bacterial sepsis (3)
Cystic fibrosis (3)
Normal (2)
Cancers such as hepatocellular carcinoma, breast cancer, colorectal cancer and related gastrointestinal cancers, urologic cancers including prostate cancer, pancreas cancer, and lung cancer), on which a significant therapeutic efficacy of Huaier has been reported. Special remarks is emphasized on the cancer cases designated to be related to cancer stem cells (2)
Pancreatic cancer (2)
Mantle cell lymphoma (1)
Scrapie infected (1)
Rheumatoid arthritis (1)
Cervical carcinoma (1)
Benign prostatic hyperplasia (1)
Reference (1)

Technology Type

Mass Spectrometry (1239)
Shotgun proteomics (727)
Bottom-up proteomics (268)
Data-dependent acquisition (111)
Data-independent acquisition (85)
Affinity purification coupled with mass spectrometry proteomics (56)
SWATH MS (50)
Gel-based experiment (49)
Top-down proteomics (38)
DiaPASEF (10)
All-ion fragmentation (9)
Chemical cross-linking coupled with mass spectrometry proteomics (9)
HDMSE (6)
Mass spectrometry imaging (6)
Affinity proteomics (5)
MSE (4)
Proteogenomics (4)
SRM/MRM (3)
Mass spectrometry (1)
Immunopeptidomics (1)

Instrument Platform

Illumina NovaSeq 6000 (10)
Illumina HiSeq 2500 (6)
Illumina HiSeq 4000 (6)
Instrument (5)
Illumina HiSeq 2000 (4)
NextSeq 500 (4)
NextSeq 550 (2)
Q Exactive (2)
Q Exactive HF-X (2)
Nanodrop (1)
Agilent 2100 Bioanalyzer (Agilent Technologies); Qubit Fluorometer (Thermo Fisher Scientific); standard electrophoresis system (1)
NanoDrop spectrophotometer, Agilent 2100 Bioanalyzer (1)
Nanodrop 2000c spectrophotometer (1)
VAHTS Universal V6 RNA-seq Library Prep Kit for Illumina (Vazyme); manual library preparation (1)
Agilent 2200 TapeStation system; centrifuge; Trizol reagent (1)
Flow cytometer (for CD146+/- cell sorting) (1)
G2565BA DNA microarray scanner (1)
Agilent 2100 Bioanaylzer and ABI StepOnePlus Real-Time PCR System (1)
Scanning hardware (1)
None (1)
R (1)
NextSeq 2000 (1)
Illumina iSeq 100 (1)
DNBSEQ-T7 (1)
HiSeq X Ten (1)
LC-MS/MS (1)
LTQ Orbitrap (1)
LTQ XL (1)
Orbitrap Exploris 480 (1)
Q Exactive HF (1)

Publication Date

2025 (291)
2022 (287)
2021 (276)
2026 (260)
2024 (244)
2023 (219)
2020 (185)
2019 (143)
2018 (111)
2014 (102)
2012 (86)
2016 (78)
2017 (77)
2015 (74)
2013 (69)
2010 (64)
2011 (43)
2008 (41)
2009 (28)
2007 (25)
2006 (8)
2005 (5)

UNIPROT ID/AC

14331_ORYSJ (2)
14332_ORYSJ (2)
14333_ORYSJ (2)
14334_ORYSJ (2)
14335_ORYSJ (2)
14336_ORYSJ (2)
2ABA_ORYSJ (2)
40G2_ORYSJ (2)
6PGD1_ORYSJ (2)
6PGD2_ORYSJ (2)
6PGL4_ORYSJ (2)
A0A024FLK4_ORYSJ (2)
A0A0N7KDM0_ORYSJ (2)
A0A0N7KG12_ORYSJ (2)
A0A0N7KGX7_ORYSJ (2)
A0A0N7KH16_ORYSJ (2)
A0A0N7KIK0_ORYSJ (2)
A0A0N7KJV4_ORYSJ (2)
A0A0N7KKI1_ORYSJ (2)
A0A0P0V093_ORYSJ (2)
A0A0P0V197_ORYSJ (2)
A0A0P0V1X3_ORYSJ (2)
A0A0P0V4P0_ORYSJ (2)
A0A0P0V7A3_ORYSJ (2)
A0A0P0V994_ORYSJ (2)
A0A0P0VEP5_ORYSJ (2)
A0A0P0VH79_ORYSJ (2)
A0A0P0VLJ4_ORYSJ (2)
A0A0P0VNU0_ORYSJ (2)
A0A0P0VQM8_ORYSJ (2)

CHEBI ID

CHEBI:192835 (1)
CHEBI:192874 (1)
CHEBI:192865 (1)
CHEBI:177911 (1)
CHEBI:188954 (1)
CHEBI:192861 (1)
CHEBI:192856 (1)
CHEBI:192851 (1)
CHEBI:192847 (1)
CHEBI:192842 (1)
CHEBI:192837 (1)
CHEBI:192008 (1)
CHEBI:191514 (1)
CHEBI:174343 (1)
CHEBI:191499 (1)
CHEBI:175535 (1)
CHEBI:190868 (1)
CHEBI:186226 (1)
CHEBI:175534 (1)
CHEBI:192935 (1)
CHEBI:191701 (1)
CHEBI:174891 (1)
CHEBI:174502 (1)
CHEBI:174654 (1)
CHEBI:192927 (1)
CHEBI:192923 (1)
CHEBI:191806 (1)
CHEBI:191626 (1)
CHEBI:192922 (1)
CHEBI:191734 (1)

Metabolite Name

Udp-l-arabinose (1)
6-hydroxyflavone-alpha-D-glucoside (1)
Methyl 2,6-dihydroxybenzoate (1)
2-hydroxyundecanoate (1)
4-hydroxy-3-methoxyphenylglycol (1)
6-o-[alpha-d-glucopyranosyl]-d-fructose (1)
6-o-methyl-alpha-D-glucopyranose (1)
2-methyl-2,4-dihydroxyglutarate (1)
Glycerol-3-galactoside (1)
1,2,4-butanetriol (1)
6(5h)-benzo[c]phenanthridinone, 11,12-dihydro- (1)
Indole-3-lactate (1)
Glycero-d-gulo-heptose (1)
1,4-dihydroxy-2,6-dimethoxybenzene (1)
7-(1-methylethyl)-5-oxo-2-amino-5h-chromeno[2,3-b]pyridine-3-carboxylate (1)
1-butanol (1)
D-fructose 2,6-bisphosphate (1)
Altrose (1)
2-methylpropan-2-ol (1)
2-o-methyl-gluconic acid (1)
N'-(1h-indol-3-ylmethylene)benzohydrazide (1)
Methyl alpha-d-fructofuranoside (1)
2-desoxy-inosose (1)
2,4-dihydroxy-pentanedioic acid (1)
N-carbamylglutamate (1)
5-hydroxypipecolic acid (1)
Arabino-hexos-2-ulose, bis(dimethyl acetal) (1)
2-deoxy-d-erythro-pentitol (1)
3,4-dihydroxy-2,5-furandione (1)
Octanoate radical (1)

First Public Date

2014 (188)
2025 (186)
2024 (164)
2021 (164)
2026 (133)
2020 (132)
2023 (131)
2022 (114)
2019 (98)
2018 (55)
2017 (50)
2015 (35)
2016 (32)
2013 (28)
2012 (1)
2011 (1)

Modelling Approach

Ordinary differential equation model (1)

Study status

Recruiting (2)

Lab affiliation

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, 50463, Republic of Korea (5)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (5)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (5)
1 Department of Cardiac Surgery, Fujian Medical University Union Hospital, Fuzhou, China 2 Department of Toxicology, Fujian Center for Evaluation of New Drug, Fujian Medical University, Fuzhou, China (4)
1VIB-UGent Center for Medical Biotechnology, VIB, 9052 Ghent, Belgium 2Department of Biomolecular Medicine, Ghent University, 9052 Ghent, Belgium (4)
DEPARTMENT OF MEDICINE, ALL INDIA INSTITUTE OF MEDICAL SCIENCES, ANSARI NAGAR, NEW DELHI-110029 (4)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center Germany (4)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (4)
Nantong Key Laboratory of Environmental Toxicology, Department of Occupational Medicine and Environmental Toxicology, School of Public Health, Nantong University, Nantong, China (4)
Northwest University (4)
Shandong University (4)
Shenzhen Second People’s Hospital, The First Affiliated Hospital of Shenzhen University, Shenzhen, China (4)
Agronomy College, Henan Agricultural University, China (3)
China Agricultural University (3)
College of Veterinary Medicine, Northwest A&F University (3)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)
Department of Molecular & Clinical Cancer Medicine Institute of Systems, Molecular & Integrative Biology University of Liverpool (3)
First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China (3)
IRCCS Istituto G Gaslini (3)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (3)
Shandong Agricultural University (3)
Shenzhen Center for Disease Control and Prevention (3)
Shenzhen People’s Hospital (3)
Tianjin Medical University General Hospital (3)
Zhejiang Academy of Agricultural Sciences (3)
Agronomy College/National Key Laboratory of Wheat and Corn Crop/Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural University ,Zhengzhou China (2)
BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea (2)
Beijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, Beijing, China (2)
Beijing Tongren Hospital, Capital Medical University (2)
COI-NDM (University of Oxford) (2)

IsPrivate

False (1)

Classification

bacteria (12)
fungi (8)
protozoa (7)
helminths (1)

Modification

2x(15)N labeled L-lysine (2)
4-tetrahydrothiazine-3-carboxylic acid (2)
4x(15)N labeled L-arginine (2)
N6 (2)
N6-dimethyl-L-lysine (2)
15.99491 (1)
3'' (1)
57.02146 (1)

Study type

Transcription profiling by array (286)
RNA-seq of coding RNA (81)
ChIP-seq (7)
Unknown experiment type (5)
Methylation profiling by array (4)
RNA-seq of total RNA (4)
RNA-seq of non coding RNA (4)
Transcription profiling by SAGE (3)
Animal - High-throughput sequencing (3)
Methylation profiling by high throughput sequencing (3)
Comparative genomic hybridization by array (2)
RNA-seq of coding RNA from single cells (2)
Interventional (2)
Animal - Two-color microarray (1)
Animal - One-color microarray (1)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)

Release Date

2022 (1799)
2021 (1321)
2023 (1279)
2020 (1041)
2025 (1014)
2024 (977)
2019 (680)
2018 (490)
2017 (363)
2016 (336)
2015 (304)
2014 (238)
2013 (224)
2012 (188)
2011 (128)
2010 (127)
2008 (101)
2026 (92)
2009 (88)
2007 (59)
2006 (41)
2005 (25)
2004 (10)
2003 (7)
2002 (3)
2001 (1)

Location

Japan (2)

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The Gene Ontology project in 2008.

Not available

S-EPMC2238979 | biostudies-literature

The Gene Ontology (GO) database and informatics resource.

Not available

S-EPMC308770 | biostudies-literature

The Gene Ontology Resource: 20 years and still GOing strong.

Not available

S-EPMC6323945 | biostudies-literature

Creating the gene ontology resource: design and implementation.

Not available

S-EPMC311077 | biostudies-literature

The ontology of the gene ontology.

Not available

S-EPMC1480173 | biostudies-literature

On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report.

Not available

S-EPMC3280971 | biostudies-literature

SGP2024 - Apoptosis_AgNPs

This model explores the temporal dynamics of silver nanoparticles (AgNPs)-induced apoptosis using dynamic simulations in COPASI. It provides a time-resolved framework for understanding how cellular stress progresses to programmed cell death.

2025-09-08 | MODEL2412210001 | BioModels

The representation of heart development in the gene ontology.

Not available

S-EPMC3302178 | biostudies-literature

Annotation of gene product function from high-throughput studies using the Gene Ontology.

Not available

S-EPMC6355445 | biostudies-literature

The Gene Ontology of eukaryotic cilia and flagella.

Not available

S-EPMC5688719 | biostudies-literature