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GenomicsA Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure.
Prader-Willi syndrome (PWS), a genetic cause of childhood obesity, is characterized by intellectual disabilities and sleep abnormalities. PWS-causing deletions include a neuronal long, non-coding RNA (lncRNA) processed into small nucleolar RNAs and a spliced lncRNA,116HG. We show that 116HG forms a ...
ORGANISM(S): Mus musculus 
2013-06-20 | E-GEOD-43575 | biostudies-arrayexpress
TranscriptomicslncRNA expression profiles for preterm premature rupture of membrane (PPROM)
Investigation of lncRNA expression profile of PPROM Arraystar Human LncRNA Array v2.0 was applied to study 40 placentas.
ORGANISM(S): Homo sapiens 
2013-12-18 | E-GEOD-50879 | biostudies-arrayexpress
TranscriptomicsThe evolution of lncRNA repertoires and expression patterns in tetrapods
Only a minuscule fraction of long non-coding RNAs (lncRNAs) are well characterized. The evolutionary history of lncRNAs can provide insights into their functionality, but comparative analyses have been precluded by our ignorance of lncRNAs in non-model organisms. Here, we use RNA sequencing to ident...
ORGANISM(S): Ornithorhynchus anatinus 
2014-01-19 | E-GEOD-43520 | biostudies-arrayexpress
TranscriptomicsLncRNA profile study reveals a three-lncRNA signature associated with the survival of esophageal squamous cell carcinoma patients (original)
Objective: Globally, esophageal cancer is among the most deadly cancer forms. Long non-coding RNAs (lncRNA) are frequently found to have important regulatory roles. We aim to assess the lncRNA expression profile of esophageal squamous cell carcinoma (ESCC) and identify prognosis related lncRNAs. Des...
ORGANISM(S): Homo sapiens 
2014-03-07 | E-GEOD-53624 | biostudies-arrayexpress
TranscriptomicsLncRNA profile study reveals a three-lncRNA signature associated with the survival of esophageal squamous cell carcinoma patients (independent set)
Objective: Globally, esophageal cancer is among the most deadly cancer forms. Long non-coding RNAs (lncRNA) are frequently found to have important regulatory roles. We aim to assess the lncRNA expression profile of esophageal squamous cell carcinoma (ESCC) and identify prognosis related lncRNAs. Des...
ORGANISM(S): Homo sapiens 
2014-03-07 | E-GEOD-53622 | biostudies-arrayexpress
TranscriptomicsLncRNA and mRNA expression data involved in benzene hematotoxicity
Benzene is a ubiquitous environmental pollutant and an established human hematotoxicant and leukemogen. New insights into the pathogenesis of benzene hematotoxicity are urgently needed. Long non-coding RNA（lncRNA）can regulate gene expression and widely participate in the various physiological and pa...
ORGANISM(S): Homo sapiens 
2015-07-27 | E-GEOD-50737 | biostudies-arrayexpress
ProteomicsIdentifying lncRNA-protein interactions in hematopoietic progenitor cells by hybridization capture and mass spectrometry
Long non-coding RNAs (lncRNAs) exert regulatory functions in a wide spectrum of biological contexts, and certain regulatory functions involve the formation of RNA-protein complexes. Discovering the structure/function of these complexes may unveil important functional insights. The DDX41 gene encodin...
ORGANISM(S): Mus musculus (Mouse) 
2025-07-17 | PXD062695 | Pride
Lncrna  lncrna-protein interaction  hematopoiesis  mass spectrometry  proteomics  hybridization capturelncrna  lncrna-protein interaction  hematopoiesis  mass spectrometry  proteomics  hybridization capture 
ProteomicslncRNA-protein interactions in hematopoietic progenitor cells by hybridization capture and mass spectrometry
Long non-coding RNAs (lncRNAs) exert regulatory functions in a wide spectrum of biological contexts, and certain regulatory functions involve the formation of RNA-protein complexes. Discovering the structure/function of these complexes may unveil important functional insights. The DDX41 gene encodin...
ORGANISM(S): Mus musculus (Mouse) 
2025-01-13 | PXD055956 | Pride
Lc/ms Mouse Hypr-ms Rna-protein interaction 
Proteomicssin-lncRNA interactors in senescent fibroblasts MS
sin-lncRNA is a noncoding RNA molecule with a role in cellular senescence. In vitro RNA pulldown of biotynilated sin-lncRNA was performed to identify sin-lncRNA specific protein partners
ORGANISM(S): Homo sapiens (Human) 
2025-04-29 | PXD044718 | Pride
Human fibroblasts Lncrna Ois Lc/ms/ms Senescence 
TranscriptomicslncRNA expression data
Once thought to be transcriptional noise, large non-coding RNAs (lncRNAs) have recently been demonstrated to be functional molecules. Cell type-specific expression patterns of lncRNAs suggest that their transcription may be regulated epigenetically. Using a custom-designed microarray, here we exam...
ORGANISM(S): Mus musculus 
2010-08-05 | E-GEOD-22451 | biostudies-arrayexpress
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