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GenomicsMINC Regulates Pervasive Transcription in Yeast and Mammals
MINC Regulates Pervasive Transcription in Yeast and Mammals
PRJNA377731 | ENA
ProteomicsThe PAF1 complex promotes 3‘ processing of pervasive transcripts
The PAF1 complex (PAF1C) functions in multiple transcriptional processes involving RNA Polymerase II (Pol II). eRNAs and PROMPTs are pervasive transcripts transcribed by Pol II and rapidly degraded by the nuclear exosome complex after 3’ endonucleolytic cleavage by the Integrator complex (Integrator...
ORGANISM(S): Homo sapiens (Human) 
2022-03-03 | PXD031531 | Pride
Transcription regulation  enhancer rna  3' end processing  paf1 complex  integrator complex  pervasive transcription 
GenomicsPervasive transcription-dependent chromatin remodeling influences the replication initiation program
Pervasive transcription-dependent chromatin remodeling influences the replication initiation program
PRJNA435729 | ENA
TranscriptomicsRho and NusG suppress pervasive antisense transcription in Escherichia coli [RNA-seq].
Despite the prevalence of antisense transcripts in bacterial transcriptomes, little is known about how their synthesis is controlled. We report that a major function of the Escherichia coli termination factor Rho and its co-factor NusG is suppression of ubiquitous antisense transcription genome-wide...
ORGANISM(S): Escherichia coli K-12 
2012-11-01 | E-GEOD-41939 | biostudies-arrayexpress
Genomics7SK-BAF axis controls pervasive transcription at enhancers [ChIRP-Seq]
7SK-BAF axis controls pervasive transcription at enhancers [ChIRP-Seq]
PRJNA284635 | ENA
TranscriptomicsMeasuring the effects of pervasive transcription on promoter activity in Salmonella Pathogenicity Island 1 by semiquantitative 5’RACE-Seq
Pervasive Transcription originates from spurious promoters present in both orientations within coding sequences. Spurious transcripts are typically untranslated and thus for the most part are terminated by transcription termination factor Rho. They can be studied by impairing Rho activity, which in ...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 
2022-07-04 | E-MTAB-11419 | biostudies-arrayexpress
UnknownPervasive transcription fine-tunes replication origin activity.
Not available
S-EPMC6314782 | biostudies-literature
TranscriptomicsRho and NusG suppress pervasive antisense transcription in Escherichia coli
This SuperSeries is composed of the following subset Series: GSE41936: Rho and NusG suppress pervasive antisense transcription in Escherichia coli [ChIP-chip]. GSE41938: Rho and NusG suppress pervasive antisense transcription in Escherichia coli [tiling array]. GSE41939: Rho and NusG suppress pervas...
ORGANISM(S): Escherichia coli K-12 
2012-11-01 | E-GEOD-41940 | biostudies-arrayexpress
TranscriptomicsSuppression of pervasive noncoding transcription in embryonic stem cells by esBAF
Approximately 75% of the human genome is transcribed, the majority of which does not encode protein. However, most noncoding RNA (ncRNA) is rapidly degraded after transcription, and relatively few have established functions, questioning the significance of this observation. Here we show that esBAF, ...
ORGANISM(S): Mus musculus 
2015-02-12 | E-GEOD-57170 | biostudies-arrayexpress
UnknownPervasive transcription of a herpesvirus genome generates functionally important RNAs.
Not available
S-EPMC3952160 | biostudies-literature
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