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TranscriptomicsTranscriptome profiling of various organs at different developmental stages in rice (single-end)
To identificate long noncoding RNAs in rice, we profiled transcriptome of various organs at different developmental stages using stranded single-end RNA-seq based on poly(A) selection. Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering,...
ORGANISM(S): Oryza sativa Japonica Group 
2015-11-25 | E-GEOD-56463 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling of various organs at different developmental stages in rice (paired-end)
To identificate long noncoding RNAs in rice, we profiled transcriptome of various organs at different developmental stages using nondirectional paired-end RNA-seq based on poly(A) selection. Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flow...
ORGANISM(S): Oryza sativa Japonica Group 
2015-11-25 | E-GEOD-56462 | biostudies-arrayexpress
ProteomicsProtein profile of commercial rice milks analyzed by label-free quantitative proteomics
Rice milk is a non-diary beverage made primarily from milled rice and water that has an opaque white or beige color and creamy texture resembling that of cow’s milk. Rice milk is generally considered hypoallergic and gluten-free hence, is an excellent choice for people with lactose intolerance and m...
ORGANISM(S): Oryza sativa (Rice) 
2024-12-06 | PXD043429 | Pride
Plant-based milk  rice milk  allergen  amylase  proteomics  protein  functional drink/beverage 
GenomicsSelective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine in rice
We generated a genome-wide map of 5hmC in rice panicle using a sensitive chemical labeling method to capture DNA fragments with 5hmC modification, followed by NGS sequencing. We showed that the 5hmC peaks distribution is non-random, about 52% 5hmC was located in gene bodies, 25% in intergenic region...
ORGANISM(S): Oryza sativa 
2014-04-15 | E-GEOD-37242 | biostudies-arrayexpress
ProteomicsDiscovery and quantification of non-human proteins in human milk
The question whether and which non-human peptides or proteins are present in human milk was raised many decades ago. However, due to cross-reactivity or nonspecific antibody recognition, the accuracy of detection by immunochemical methods has been a concern. Additionally, the relative low-abundance ...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Felis catus (Cat) (Felis silvestris catus) Canis familiaris (Dog) (Canis lupus familiaris) Gallus gallus (Chicken) Oryza sativa (Rice) Equus caballus (Horse) 
2018-12-04 | PXD011599 | Pride
Non-human peptides Shotgun proteomics Human milk Mass spectrometry Non-human proteins Parallel reaction monitoring 
ProteomicsDiscovery and quantification of non-human proteins in human milk
The question whether and which non-human peptides or proteins are present in human milk was raised many decades ago. However, due to cross-reactivity or nonspecific antibody recognition, the accuracy of detection by immunochemical methods has been a concern. Additionally, the relative low-abundance ...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Felis catus (Cat) (Felis silvestris catus) Canis familiaris (Dog) (Canis lupus familiaris) Gallus gallus (Chicken) Oryza sativa (Rice) Equus caballus (Horse) 
2020-11-04 | PXD010413 | Pride
Non-human peptides Shotgun proteomics Human milk Mass spectrometry Non-human proteins Parallel reaction monitoring 
ProteomicsTolerogenic effect elicited by protein fraction derived from different formulas for dietary treatment of cow’s milk allergy in human cells
Comparative evaluation of tolerogenic effect elicited by the protein/peptide fraction of different formulas available for the dietary treatment of CMA. Peptides from digests of extensively hydrolyzed casein formula (EHCF) elicited tolerogenic effects. Peptides from EHCF and relevant digests (in vitr...
ORGANISM(S): Bos taurus (Bovine) 
2021-02-09 | PXD023355 | Pride
Milk peptides T regulatory cells Intestinal epithelium Infant formulas Infant simulated digestion. Mucosal immune barrier 
UnknownMacronutrient variability in human milk from donors to a milk bank: Implications for feeding preterm infants.
Not available
S-EPMC6347243 | biostudies-literature
UnknownIntegrated omic analysis of a new flavor yeast strain in fermented rice milk.
Not available
S-EPMC11995695 | biostudies-literature
UnknownExploring bioactive and nutritional profiles in plant-based milk alternatives from green rice (Khao Dawk Mali 105) and its milling fractions.
Not available
S-EPMC12775921 | biostudies-literature
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